SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene37521

Length: 763 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene37521

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	origin recognition complex3 [Oryza sativa Japonica Group]	-	-	45%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	53%
Blast2go	origin recognition complex subunit	-	-	69%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	0.0	69%

Source	InterPros	Term	Type	e value	Identity
Sma3		IPR010748	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
386	66		33		1.0
387	66			33	1.0
388	50	50			1.0
389		16	83		0.994517
391			33	66	1.0
392	33			66	1.0
393		83	16		0.994517
394	16			50	1.0
395		83	16		0.994517
398		60		40	1.0
399	60		40		1.0
400	60		40		1.0
403			40	40	1.0
405		40		60	1.0
406	40			60	1.0
409		40		60	1.0
410	40		60		1.0
464			66	33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain