SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene35395

Length: 939 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene35395

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	putative phosphatidylinositol 3,5-kinase [Oryza sativa Japonica Group] gb\|ABF96451.1\| phosphatidylinositol-4-phosphate 5-kinase family protein, putative, expressed [Oryza sativa Japonica Group]	-	-	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	87%
Blast2go	fyve finger-containing phosphoinositide	-	-	86%

Source	GOs	Term	Type	e value	Identity
Blast2go	kinase activity	GO:0016301	Molecular Function	0.0	86%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphatidylinositol-4-phosphate 5-kinase, core	IPR002498	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5ABH6

Fln msg: Distance to subject end: 65 aas, your sequence is shorter than subject: 288 - 318

Fln protein: MSDGIPKEKSYGSDDSFTSGSKWTGVADPFNYTKAMHVKVSFTDESSPGKVKYTVTCYYAKQFDSLRRKCCPTEVDFICSLCRCKKWGAQGGKSNVFFAKTLDERFIIKQVTKTELESFIKFAPEYFRYLSDSLSTGSPTCLAKVLGIYQVTAKNAKGGKEVRMDLIVMENLLFGRNITRLYDLKGSLRSRYNADSSGSNKVLLDQNLLEAMPTSPIFVGNRAKRLLERAVWNDTSFLASIDVMDYSLLVGVDEERHELVLGIIDFMRQYTWDKHLETWVKASGILGG

Protein Length: 289

Fln nts: GAAAAGGAAACTGGGGATTCATCTTTTACCGATGAAGTTCTTTCTCATCCAATTCAGAGATTAGATGGGTCTGAC_-_ATGTCTGATGGTATTCCTAAAGAGAAAAGTTATGGATCTGATGATAGTTTTACATCAGGCAGTAAATGGACTGGAGTGGCAGATCCATTTAACTATACAAAGGCTATGCATGTGAAGGTGTCATTTACTGATGAAAGCTCTCCTGGAAAGGTAAAGTACACTGTAACTTGTTATTATGCAAAGCAGTTTGATTCCCTTAGAAGAAAATGTTGCCCAACAGAAGTGGATTTTATTTGTTCACTATGCCGTTGTAAGAAATGGGGAGCACAAGGTGGAAAAAGCAATGTGTTTTTTGCAAAGACTTTGGATGAGAGATTCATCATTAAGCAAGTTACAAAGACAGAATTGGAGTCCTTTATCAAGTTTGCCCCAGAATACTTCAGATACCTTTCAGACTCTTTAAGTACAGGGAGCCCTACATGTCTTGCAAAGGTTCTTGGTATTTATCAGGTTACTGCAAAGAATGCAAAAGGTGGAAAGGAGGTTAGGATGGATCTCATTGTAATGGAAAATCTTTTGTTTGGGAGGAATATAACACGACTGTATGACCTGAAGGGATCTCTTCGGTCACGTTACAATGCAGATTCATCAGGAAGTAATAAAGTTCTTTTAGATCAGAATCTTTTGGAAGCCATGCCTACCTCCCCAATCTTTGTAGGTAATAGGGCTAAGCGCCTTTTGGAGAGAGCTGTCTGGAACGACACTTCATTTCTCGCGTCAATTGATGTAATGGATTATTCATTACTGGTTGGAGTTGATGAAGAGCGACATGAACTGGTTTTGGGCATTATTGATTTTATGAGGCAATACACGTGGGACAAACATCTTGAGACTTGGGTGAAAGCTTCTGGTATACTCGGTGGG

Fln Alignment:

AllPineV4_c27110___MHVKVSFTDESSPGKVKYTVTCYYAKQFDSLRRKCCPTEVDFICSLCRCKKWGAQGGKSNVFFAKTLDERFIIKQVTKTELESFIKFAPEYFRYLSDSLSTGSPTCLAKVLGIYQVTAKNAKGGKEVRMDLIVMENLLFGRNITRLYDLKGSLRSRYNADSSGSNKVLLDQNLLEAMPTSPIFVGNRAKRLLERAVWNDTSFLASIDVMDYSLLVGVDEERHELVLGIIDFMRQYTWDKHLETWVKASGILGG
D5ABH6_______________MHAKVSFRDEGPPRKVKYSVTCYYAKQFDALRKKCCPTEMDFRLSLSRCKKWGAQGGKSNVFFAKSLDERFIIKQVTRTELESFIKFASEYFKYLSDSLSSGSPTCLAKILGIYQVTIKNTKSGKEIRMDLMVMENLLFGRNVTRVYDLKGSGRSRYNADSSGNNKVLLDQNLLETMPTSPIFLGNKAKRLLERAVWNDTSFLASIDVMDYSLLVGVDEERCELVLGIIDFMRQYTWDKHLETWVKASGILGG

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
727		20		80	0.995493

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain