SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene35393

Length: 792 nt

Origin of reads: Biogeco1 v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene35393 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	NADH-ubiquinone oxidoreductase chain 5 n=325 Tax=Magnoliophyta RepID=NU5M_ARATH	-	-	85%
FL-Next	sp=NADH-ubiquinone oxidoreductase chain 5; berteroana). Mitochondrion.	-	-	91%
Blast2go	nadh dehydrogenase subunit 5	-	-	92%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	92%
Blast2go	generation of precursor metabolites and energy	GO:0006091	Biological Process	92%
Blast2go	oxidoreductase activity	GO:0016491	Molecular Function	92%
Blast2go	mitochondrial respiratory chain complex I	GO:0005747	Cellular Component	92%

Source	InterPros	Term	Type	Identity
Sma3	Protease inhibitor I4, serpin	IPR000215	-	-
Sma3	NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal	IPR001516	-	-
Sma3	NADH:ubiquinone/plastoquinone oxidoreductase	IPR001750	-	-
Sma3		IPR003916	-	-
Sma3	NADH-plastoquinone oxidoreductase, chain 5	IPR003945	-	-
Sma3	NADH dehydrogenase subunit 5, C-terminal	IPR010934	-	-
Sma3	NADH-plastoquinone oxidoreductase, chain 5 subgroup	IPR018393	-	-

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
401	33			66	0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain