SustainPineDB

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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene33581

Length: 395 nt

Origin of reads: Uma v2

UniGene Fasta

>sp_v2.0_unigene33581
CGTCGTGACCTTGTCTGTCGCTCGTCGGTAGATCTCGTAAAGACACAGAAATGTGGGCCTGAGGATAGGTTGAGGACCAATGAAGCAAACAATTGGGTAACCTTTCATAGTCCATTATCTGCTGCTTCCCTCGAAGCTTGAAATGCAGTTTTAACCAAACAAAACCATACGTCTGGTCCGCAAACACAGTAGACAAAATGAAGGGAAGAGGATCTCAGTCTCGCAGTATAATGCTTCGCGCTCGCATATCGACTATTATGCTCTCCATGGCTGCAGTTATGGCTTCCATTTACGTTGCCGGACGTTTGTGGCAGGAGTCAGAGGGTAGATTTATCTTTCTAAAGAACTTGACAGAAGAACTGGTCAGGGACAACCAGCTATATCTGTGGATGATA

Ace file of the UniGene sp_v2.0_unigene33581

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	beta 1,3-glycosyltransferase-like protein I [Solanum lycopersicum]	-	-	1.0e-10	48%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Blast2go	probable beta- -galactosyltransferase 11-like	-	-	6.40787e-24	68%

Source	InterPros	Term	Type	e value	Identity
Sma3	Glycosyl transferase, family 31	IPR002659	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NVS4

Fln msg: Overlapping hits, possible frame ERROR between 350 and 323, Distance to subject end: 274 aas, your sequence is shorter than subject: 66 - 340

Fln protein: MKGRGSQSRSIMLRARISTIMLSMAAVMASIYVAGRLWQESxxxxxxxxxxxRRTGQGQPAISVDD

Protein Length: 67

Fln nts: CGTCGTGACCTTGTCTGTCGCTCGTCGGTAGATCTCGTAAAGACACAGAAATGTGGGCCTGAGGATAGGTTGAGGACCAATGAAGCAAACAATTGGGTAACCTTTCATAGTCCATTATCTGCTGCTTCCCTCGAAGCTTGAAATGCAGTTTTAACCAAACAAAACCATACGTCTGGTCCGCAAACACAGTAGACAAA_-_ATGAAGGGAAGAGGATCTCAGTCTCGCAGTATAATGCTTCGCGCTCGCATATCGACTATTATGCTCTCCATGGCTGCAGTTATGGCTTCCATTTACGTTGCCGGACGTTTGTGGCAGGAGTCAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAAGAACTGGTCAGGGACAACCAGCTATATCTGTGGATGATA

Fln Alignment:

AllPineV4_c21157___MKGRGSQSRSIMLRARISTIMLSMAAVMASIYVAGRLWQESExxxxxxxxxDRRTGQGQPAISVDD
A9NVS4_______________MKGRGSQARSIMLRARISTIMLSMAAVMASIYVAGRLWQESExxxxxxxxxDRRTGQGQPAISVDD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain