SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene33492

Length: 647 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene33492

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	putative nodulin protein [Arabidopsis thaliana] gb\|AAD24599.1\| nodulin-like protein [Arabidopsis thaliana] gb\|AAL49867.1\| putative nodulin protein [Arabidopsis thaliana] gb\|AAM19945.1\| At2g16660/T24I21.7 [Arabidopsis thaliana] gb\|AAN33210.1\| At2g16660/T24	-	-	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	86%
Blast2go	nodulin protein	-	-	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to karrikin	GO:0080167	Biological Process	0.0	87%

Source	InterPros	Term	Type	Identity
Sma3	Heat shock protein DnaJ, N-terminal	IPR001623	-	-
Sma3	Hydroxymethylglutaryl-CoA reductase, class I/II	IPR002202	-	-
Sma3	Nodulin-like	IPR010658	-	-
Sma3	Major facilitator superfamily	IPR011701	-	-

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
184			71	28	1.0
199	14		85		0.993533
311	85		14		0.993533
316	14		85		0.993533
331		85		14	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain