SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene31242

Length: 949 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene31242

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF3444 domain containing protein	-	-	3.0e-28	44%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	55%
Blast2go	curved dna-binding protein	-	-	2.43378e-31	71%

Source	InterPros	Term	Type	Identity
Sma3	Heat shock protein DnaJ, N-terminal	IPR001623	-	-
Sma3	Heat shock protein DnaJ	IPR003095	-	-
Sma3	Nodulin-like	IPR010658	-	-
Sma3	Major facilitator superfamily	IPR011701	-	-
Sma3		IPR015609	-	-
Sma3	Heat shock protein DnaJ, conserved site	IPR018253	-	-

Full-Lengther Next Prediction

SNPs (tot: 34)

Position	A %	C %	G %	T %	Probability
510	66		33		0.997464
511	66			33	0.997464
521		33		66	0.997452
523			33	66	0.997476
547		16	83		0.994516
548	83		16		0.994516
549		40		60	1.0
550		16	83		0.994516
552		83		16	0.994516
553	83		16		0.994516
556	83	16			0.994516
557	83			16	0.994516
558			80	20	0.995493
560	80		20		0.995493
561	80	20			0.995493
565		16	83		0.994523
566	16		83		0.994523
567		16	83		0.994523
568			83	16	0.994523
569	80	20			0.995493
570	20		80		0.995493
580	85	14			0.993534
582	85			14	0.993534
585			85	14	0.993534
586		85	14		0.993534
588		14	85		0.993534
589	85	14			0.993534
601		16	83		0.994512
602	16		83		0.994512
603	83	16			0.994512
605	83	16			0.994512
606	16	83			0.994512
732	60	40			1.0
873		50		50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain