SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene31210

Length: 688 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene31210

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	DNA polymerase delta subunit 2 [Arabidopsis thaliana] sp\|O48520.2\|DPOD2_ARATH RecName: Full=DNA polymerase delta small subunit gb\|AAM97084.1\| putative DNA polymerase delta small subunit [Arabidopsis thaliana] gb\|AAP49515.1\| At2g42120 [Arabidopsis thaliana	-	-	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	92%
Blast2go	dna polymerase delta small subunit	-	-	89%

Source	InterPros	Term	Type	e value	Identity
Sma3	DNA polymerase alpha/epsilon, subunit B	IPR007185	-	0.0	-
Sma3	Enoyl-CoA hydratase/isomerase, conserved site	IPR018376	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 12)

Position	A %	C %	G %	T %	Probability
405	75	25			0.996473
406			25	75	0.996473
409		75	25		0.996473
414		25		75	0.996473
415		25		75	0.996473
416		75		25	0.996473
419			25	75	0.996473
420		25	75		0.996473
421	75			25	0.996473
423	75			25	0.996473
428	75	25			0.996473
431	25			75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain