SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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ECs
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene29868

Length: 656 nt

Origin of reads: Biogeco1 v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene29868

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PREDICTED: copia protein-like n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI0001DE983F	-	-	1.0e-21	33%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	30%
Blast2go	gag-pol polyprotein	-	-	6.11974e-24	53%

Full-Lengther Next Prediction

SNPs (tot: 27)

Position	A %	C %	G %	T %	Probability
107	33	66			0.997476
117	33		66		0.997452
122	33	33	33		0.997753
129	33		66		0.997452
150		66		33	0.997452
183	33	66			0.997452
198		33		66	0.997467
207	20	80			0.995493
209	20		60	20	0.99255
211		80		20	0.995493
212	20		80		0.995493
241		80		20	0.995493
243		20	20	60	0.992557
244		80		20	0.995493
278		20		80	0.995493
279	16			83	0.994512
288	40		60		1.0
298	20		80		0.995493
300		80		20	0.995493
319		80		20	0.995493
324		20		80	0.995493
326	20		80		0.995493
338		20		80	0.995495
356	25		75		0.996473
373	33		66		0.997452
380		33	66		0.997453
401		66		33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain