SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene28363

Length: 1391 nt

Origin of reads: Inia v1 Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene28363

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative glucosyltransferase [Phaseolus lunatus]	-	-	4.0e-33	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	77%
Blast2go	zeatin o-glucosyltransferase-like	-	-	0.0	71%

Source	InterPros	Term	Type	Identity
Sma3	Transcription factor, fork head	IPR001766	-	-
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	-
Sma3		IPR003612	-	-
Sma3	Nucleoporin interacting component Nup93/Nic96	IPR007231	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LPQ9

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 410 - 469

Fln protein: AR*KNLVKAAINRSNR*QK*TMINVRSKGAVLMVIYYFLFIE*FHI*ESI*AIPYIKALIHTFIRQNVYCL*NQHSVTVLRTCHGLETLVAWALRSVKTTFGRQLHG*LDEGADAVDISGLENSTAFGSGVLRVVSHCGGAGAQRLRGGRAVSTLGCDVMVLHGHHHHKYHRRHQHDVPV*HLNFDHSDKSSESGRTDYSKKSRTTESNQSSLIKRCVPYRPFLWVVRVADRARFTALDETQMDSISELLPEGYESRIAGRGLLVKNWAPQLDILSHESTGGFVTHCGWNSTLESISAGIPMVGWPLHSDQYANSILVARKLKVGVEVKNWMKADEYELVTAEDVEKAIRRVMGEDEEAREMRRRAKEFKEAARRAVGKEGSSWNELESFINHFTFILNEKNSTGRRMV*

Protein Length: 411

Fln nts: AGCAAGATAGAAAAATCTGGTAAAGGCGGCCATAAACAGAAGTAATAGATAACAAAAATAAACCATGATTAATGTGCGCAGCAAAGGAGCAGTACTCATGGTAATTTATTATTTCTTATTTATAGAATAATTTCATATCTAGGAAAGCATCTGAGCAATTCCATATATAAAAGCTCTCATACACACATTTATTAGGCAGAATGTCTACTGTCTCTGAAACCAGCACTCAGTCACGGTCTTGAGAACCTGTCACGGTCTTGAGACCCTAGTCGCTTGGGCACTGAGGAGTGTCAAGACCACATTCGGAAGGCAATTGCATGGTTGATTGGACGAGGGCGCAGATGCAGTCGACATTAGCGGTCTGGAGAACAGCACAGCATTCGGGAGTGGGGTCCTGCGGGTTGTTTCCCACTGCGGAGGCGCAGGGGCTCAGCGACTCCGCGGTGGCCGCGCAGTCAGCACTTTGGGCTGCGACGTGATGGTTTTGCATGGCCACCACCACCATAAATATCATCGCCGCCACCAACACGACGTTCCCGTTTGACACCTGAATTTTGACCATTCTGATAAATCTTCTGAAAGCGGCAGAACTGACTATTCAAAAAAAAGTAGAACCACGGAAAGTAATCAAAGTAGTTTGATTAAACGTTGTGTCCCATATCGGCCTTTTCTCTGGGTAGTCAGGGTTGCAGATAGAGCTCGTTTCACAGCGTTGGATGAAACGCAGATGGACTCGATAAGCGAGCTGCTTCCCGAAGGTTACGAGAGCCGAATTGCAGGACGCGGCTTGCTGGTGAAAAACTGGGCGCCCCAACTTGATATCTTATCACATGAGTCCACCGGAGGTTTCGTAACGCACTGCGGGTGGAATTCGACATTGGAAAGCATCAGCGCGGGTATTCCCATGGTGGGTTGGCCTTTACATTCAGATCAGTACGCGAACTCGATACTGGTGGCGAGGAAGTTGAAGGTGGGCGTGGAAGTAAAGAATTGGATGAAGGCAGACGAGTATGAGTTGGTGACGGCGGAGGACGTGGAAAAGGCGATCAGACGAGTGATGGGGGAAGATGAAGAAGCAAGAGAAATGAGGAGAAGGGCCAAAGAATTCAAAGAGGCCGCTCGCAGGGCAGTTGGAAAGGAAGGCTCGTCGTGGAATGAGTTGGAGTCGTTTATCAATCATTTTACGTTCATATTGAATGAAAAAAATTCAACCGGACGGAGAATGGTCTGA___TTTCAGCGAGCGTTAGCGTAAGCGTGCATGCGTGCCAAGGTATGAAATTTGAATATGCCTCGTTTATTCTTTCACGGGAGTTGACGTTCAAGGCTGTAATAGAAAGGTTAATTTTAAAAGCTATCAAGTTAGTCTAATAGAAAGGGTAATTTTAAAAAAA

Fln Alignment:

AllPineV4_c2922___RPFLWVVRVADRARFTALDETQMDSISELLPEGYESRIAGRGLLVKNWAPQLDILSHESTGGFVTHCGWNSTLESISAGIPMVGWPLHSDQYANSILVARKLKVGVEVKNWMKADEYELVTAEDVEKAIRRVMGXXXXXXXXXXXXXXXXXXXXXXVGKEGSSWNELESFINHFTFILNEKNS
B8LPQ9_______________RSFLWVVRVADSARFTASDEARMDWISELLPEGYEGRIAGRGFLVRNWAPQLDILSHKATGGFVTHCGWNSTLESISAGVPMVTWPLHSDQFANSILVARELKVGVEVKKWTKADENELVMAEEVEKAIGRLMAEDGEGLEIRSRAKELGLAARRAVAEGGSSFKELESFIHHFTSILDERNN

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
1104	86		13		0.999973

SSRs (tot: 1)

Start position	End position	Sequence	Length
493	504	CCA CCA CCA CCA	12

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain