SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene27965

Length: 1199 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene27965

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Phospholipase D p1 n=2 Tax=Arabidopsis RepID=PLDP1_ARATH	-	-	71%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	32%
Blast2go	phospholipase d p1-like	-	-	79%

Source	GOs	Term	Type	Identity
Blast2go	cellular response to phosphate starvation	GO:0016036	Biological Process	79%
Blast2go	root development	GO:0048364	Biological Process	79%
Blast2go	catalytic activity	GO:0003824	Molecular Function	79%

Source	InterPros	Term	Type	Identity
Sma3	Phospholipase D/Transphosphatidylase	IPR001736	-	-
Sma3	Pleckstrin homology domain	IPR001849	-	-
Sma3	Pleckstrin homology-like domain	IPR011993	-	-
Sma3	Phospholipase D	IPR015679	-	-
Sma3	Phospholipase D, eukaryota	IPR016555	-	-

Full-Lengther Next Prediction

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
663		66	33		0.997452
664	66		33		0.997452
786	33	66			0.997452
867		80		20	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain