SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene27954

Length: 1380 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene27954

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Senescence-associated protein 12 n=1 Tax=Zea mays RepID=B6U1F2_MAIZE	-	-	40%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	70%
Blast2go	senescence dehydration-associated protein	-	-	60%

Source	InterPros	Term	Type	e value	Identity
Sma3	Senescence/spartin-associated	IPR009686	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NV63

Fln msg: your sequence is shorter than subject: 342 - 443

Fln protein: KDEPTLKLDSRHYLFSLRPPPDKEAADEDKAEERENDNDSSEILNYGVTFAGEEGLDSLDSFLEQHACLSLPAESISGTPTKASRCTCIPRWKRLNPRLGKSEGAYWTELAPRVEDYNGVVAKAIAAGSGQIIKGLFLCSNAYTSQVRKGGEFVRGRVKKATAADDHEKKKSSDAKSSHQTRKNIRRVKKLSRMTEKLTEDVLAGMITVTGAVTAPVVGSKAGQKFFSTLPGDVILASLDAFNQILDAAELAGKDAISATSEVTVEIVSHRFGEDAGEVTSDTLAVGGHAMGTAWNVFKIRKTIDPVTNGRLSASALKVVKLKKTSDAIRTASKTASKNLR*

Protein Length: 343

Fln nts: AAGGACGAGCCAACGCTCAAACTCGATTCTCGCCACTACCTCTTTTCCCTCCGTCCCCCGCCTGACAAAGAGGCCGCAGATGAAGATAAAGCTGAAGAGAGAGAAAATGATAACGACAGCTCTGAGATACTGAATTATGGTGTAACTTTTGCAGGCGAAGAGGGCTTGGATTCGCTGGACAGTTTTCTTGAGCAGCACGCTTGTCTTTCGTTGCCCGCGGAATCGATCAGCGGCACGCCCACGAAGGCTTCTCGCTGCACGTGCATTCCACGGTGGAAGCGCCTTAATCCGCGATTGGGGAAATCGGAGGGAGCATACTGGACTGAGTTGGCGCCGAGGGTCGAAGACTATAACGGTGTTGTGGCGAAGGCCATTGCTGCGGGGTCGGGGCAGATCATCAAGGGCTTATTCCTCTGCTCCAATGCTTATACTTCTCAGGTGCGGAAAGGCGGCGAATTCGTGCGAGGCCGAGTGAAGAAAGCCACCGCAGCAGATGACCATGAAAAGAAAAAAAGCAGTGATGCCAAGAGCAGTCATCAGACAAGGAAAAACATTCGAAGGGTGAAAAAGCTCTCGAGGATGACAGAAAAGCTAACTGAGGACGTGCTGGCGGGGATGATCACAGTAACCGGTGCCGTGACTGCTCCGGTTGTTGGCTCCAAGGCTGGCCAGAAGTTCTTTAGCACGTTACCTGGAGATGTCATTCTTGCTTCCCTGGATGCTTTCAATCAAATTTTAGACGCCGCTGAACTAGCAGGGAAGGATGCTATATCAGCCACTTCTGAGGTTACAGTTGAAATTGTTTCACACAGGTTTGGGGAGGATGCTGGGGAGGTAACAAGTGACACGCTTGCAGTTGGGGGTCATGCTATGGGAACTGCATGGAACGTGTTTAAGATTCGGAAGACCATCGATCCTGTAACGAATGGAAGGCTATCAGCATCGGCTTTGAAGGTTGTAAAACTCAAGAAAACCAGCGACGCAATCAGGACTGCATCAAAAACTGCATCCAAGAATTTACGCTAA___GGGTGTTGCTCGAATTGAAATGCTTCTCTTTCTATATTTTTATCTTGATGGCTCCCCACATGTATATGTATTTATTTTGATGTAAATAGAATCTGAAAGTATGAAGATAATTTTCGCAAGACCACACAAGTTAGGCTTATGTAAACGCTGTGATTTGGAGTATATAGGGGAGAGTATATTAACAATGTAACCCCCTTCGGATAAAATCGATGTTTCTAACTGTGTAGAATGCCTGTAAAAGAATTGAAGCCAAGTAGAGCTTTTATTTTTATATATTTGAATTAGGCTGAGTTTATGCAGGGCCAATCTCAATGTCATTGTGGGATGTTATCATCAAGATTGCTGGAAGTTTAA

Fln Alignment:

Contig27954___KDEPTLKLDSRHYLFSLXXXXXXXXXXXXXXXXXXXXXXSSEILNYGVTFAGEEGLDSLDSFLEQHACLSLPAESISGTPTKASRCTCIPRWKRLNPRLGKSEGAYWTELAPRVEDYNGVVAKAIAAGSGQIIKGLFLCSNAYTSQVRKGGEFVRGRVKKAT----AADDHEKKKSSDAKSSHQTRKNIRRVKKLSRMTEKLTEDVLAGMIXXXXXXXXXXXXSKAGQKFFSTLPGDVILASLDAFNQILDAAELAGKDAISATSEVTVEIVSHRFGEDAGEVTSDTLAVGGHAMGTAWNVFKIRKTIDPVTNGRLSASALKVVKLKKTSDAIRTASK
A9NV63_______________KDEPTLKLDSRHYLFSIRLPPDEEAADKD----------SSDILNYGVTFADEEGLDSLDSFLQQHACLSLPAESTGGA-SKSTRATKWGSCDRENP-----EAAYWTALAPRVENYNSVVAKAIAAGSGQIIKGLFLCTNAYDSQLQKGGESVRGRVTKAESKTGAAADHQKKTSSHAKISPSTKRNIRRAKKLSRMTEKLSENLLAGVVTVSGGVTAPVVGSKAGQKFFRMLPGDVLLASLDAFNKVLDAAEIVGRDALSAASEATVEIVANRFGEEAGEVTHDTFAVAGHAIGTAWNVTKVRKAINPVSNGTISASALKALKLKKASKAITSASK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain