SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene27594

Length: 736 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene27594

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Vitamin-b12 independent methionine synthase, 5-methyltetrahydropteroyltriglutamate-homocysteine n=9 Tax=core eudicotyledons RepID=B9HQI3_POPTR	-	-	84%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	methionine synthase 2	-	-	90%

Source	ECs	Term	Type	e value	Identity
Blast2go	Methionine synthase.	EC:2.1.1.13	-	0.0	90%

Source	KEGGs	Term	Identity
Blast2go	Cysteine and methionine metabolism	00270	90%
Blast2go	Selenocompound metabolism	00450	90%
Blast2go	One carbon pool by folate	00670	90%
Blast2go	Metabolic pathways	01100	90%
Blast2go	Biosynthesis of secondary metabolites	01110	90%

Source	GOs	Term	Type	Identity
Blast2go	methionine biosynthetic process	GO:0009086	Biological Process	90%
Blast2go	response to salt stress	GO:0009651	Biological Process	90%
Blast2go	pollen exine formation	GO:0010584	Biological Process	90%
Blast2go	response to cadmium ion	GO:0046686	Biological Process	90%
Blast2go	methionine synthase activity	GO:0008705	Molecular Function	90%
Blast2go	fatty-acyl-CoA reductase (alcohol-forming) activity	GO:0080019	Molecular Function	90%
Blast2go	cytosol	GO:0005829	Cellular Component	90%
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	90%
Blast2go	plasma membrane	GO:0005886	Cellular Component	90%
Blast2go	apoplast	GO:0048046	Cellular Component	90%

Source	InterPros	Term	Type	Identity
Sma3	Chaperonin Cpn60/TCP-1	IPR002423	-	-
Sma3	Methionine synthase, vitamin-B12 independent	IPR002629	-	-
Sma3	Cobalamin-independent methionine synthase	IPR006276	-	-
Sma3	Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal	IPR013215	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain