SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene27029

Length: 1930 nt

Origin of reads: Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene27029

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	root-specific metal transporter [Solanum lycopersicum]	-	-	57%
FL-Next	sp=Metal transporter Nramp1; Arabidopsis thaliana (Mouse-ear cress).	-	-	64%
Blast2go	metal transporter	-	-	81%

Source	GOs	Term	Type	Identity
Blast2go	manganese ion homeostasis	GO:0055071	Biological Process	81%
Blast2go	cadmium ion transmembrane transport	GO:0070574	Biological Process	81%
Blast2go	iron ion transmembrane transport	GO:0034755	Biological Process	81%
Blast2go	manganese ion transmembrane transport	GO:0071421	Biological Process	81%
Blast2go	iron ion transmembrane transporter activity	GO:0005381	Molecular Function	81%
Blast2go	cadmium ion transmembrane transporter activity	GO:0015086	Molecular Function	81%
Blast2go	manganese ion transmembrane transporter activity	GO:0005384	Molecular Function	81%
Blast2go	plasma membrane	GO:0005886	Cellular Component	81%

Source	InterPros	Term	Type	Identity
Sma3	RNA recognition motif domain	IPR000504	-	-
Sma3	Natural resistance-associated macrophage protein	IPR001046	-	-
Sma3	Nuclear transport factor 2	IPR002075	-	-
Sma3	K Homology domain	IPR004087	-	-
Sma3	K Homology domain, type 1	IPR004088	-	-
Sma3	Nucleotide-binding, alpha-beta plait	IPR012677	-	-
Sma3		IPR018111	-	-
Sma3	Nuclear transport factor 2, Eukaryote	IPR018222	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: Q9SAH8

Fln msg:

Fln protein: MAEVSVLRSGEFRASSLIEIPKSSSLVCSNELDLSGHVKMRELKEKQGWRKFIAHIGPGFLVSIAYLDPGNLESDLQAGAQYKYELLWVILVASIFSLLIQSLAANLGVTTGKHLAEHYREEYPRNINYILWLLAEIAVIAADIPEVLGTAFALNMLFHIPLWVGVLITGLSTLLLLGMQRFGIRKLEGFVALLVFTMFGCFFGEMAYAKPKADEVVKGLFVPLLKGNGATGLGISLLGAMVMPHNLFLHSALVLSRKVSPSTSGINLACRYFLIETGVALFVAFMINVAVISVAGSICFSPNIPPEQLQNCGNLDLNASAFLLKQVLGKWSSTVFAVALLASGQSSTITGTYAGQYVMQGFLNMKMKPWLRNLITRCIAILPSLIVSLISGSSGAGKLIIISSMILSFELPFALIPLLKFTTSQTKMGPHKNSITTLVAAWAIGCCIIGINIYYLSTEFGKWLIHNSLPKVASVFIGLLVFPLMALYLAGILYLALRREKVDTYIASGESSTQSRSNPERELY*

Protein Length: 526

Fln nts: TATTACTGAGTAACA_-_ATGGCTGAGGTATCAGTCCTGAGATCAGGAGAGTTTAGGGCGAGCAGCCTAATAGAAATACCAAAGAGCTCCTCGTTGGTCTGTTCGAATGAATTGGATTTATCTGGGCATGTCAAGATGCGAGAATTGAAGGAGAAACAAGGGTGGAGAAAATTTATTGCTCATATTGGACCTGGATTTCTCGTGAGCATAGCCTACCTTGATCCTGGAAATCTGGAGTCTGATTTGCAGGCGGGCGCACAGTACAAATATGAGCTACTCTGGGTCATCCTTGTGGCGTCAATCTTTTCCTTGCTTATTCAATCCCTTGCAGCAAATTTAGGAGTCACAACAGGTAAGCATCTTGCTGAACATTACAGGGAAGAGTACCCAAGGAACATCAATTATATCTTATGGCTGCTTGCAGAAATTGCTGTTATTGCAGCAGATATTCCTGAAGTGCTGGGAACTGCGTTTGCTCTTAATATGCTGTTCCATATACCTTTATGGGTTGGTGTTCTAATAACTGGACTCAGCACACTCTTGCTCCTAGGCATGCAGAGATTTGGGATCAGAAAATTGGAGGGGTTCGTTGCTCTTCTTGTGTTTACAATGTTTGGGTGTTTCTTTGGAGAGATGGCATATGCAAAGCCTAAAGCGGACGAGGTTGTGAAAGGGCTGTTCGTGCCTCTGTTAAAGGGAAATGGAGCAACCGGTCTTGGCATCTCTCTTCTCGGAGCTATGGTTATGCCGCACAATCTATTTCTTCATTCTGCCTTGGTTCTGTCTCGTAAAGTATCTCCTTCTACTTCTGGAATTAATTTAGCATGCAGATATTTCCTCATAGAAACCGGAGTTGCTCTGTTTGTAGCATTTATGATCAACGTTGCTGTTATTTCTGTGGCCGGGTCCATCTGTTTTTCGCCAAACATACCTCCAGAGCAGTTGCAGAATTGTGGGAACTTGGACCTCAATGCATCAGCATTTCTACTAAAACAAGTTCTAGGGAAATGGAGCTCAACAGTTTTTGCGGTAGCACTCCTAGCATCTGGACAAAGCTCAACGATCACAGGAACATATGCTGGGCAGTATGTCATGCAGGGATTCCTTAATATGAAAATGAAGCCATGGCTCCGTAATCTTATCACAAGGTGCATTGCCATCCTGCCAAGTTTAATAGTATCGCTCATCAGTGGCTCTTCTGGTGCAGGGAAACTTATTATTATTTCCTCGATGATATTATCATTTGAATTGCCATTTGCTTTAATTCCCTTGCTGAAGTTTACAACCAGTCAGACAAAGATGGGACCTCACAAGAACTCAATTACTACTCTGGTTGCTGCCTGGGCGATTGGATGCTGTATCATAGGCATCAACATCTACTACCTCAGCACAGAATTTGGTAAATGGTTAATCCATAACAGTCTCCCTAAGGTTGCTTCAGTATTTATAGGACTACTGGTATTTCCACTCATGGCTCTATATCTGGCCGGAATTTTGTATTTGGCTCTTCGGCGAGAGAAGGTGGACACTTATATAGCTTCAGGAGAATCCTCCACGCAAAGTCGTTCAAACCCTGAACGAGAACTATATTAG___TGACCAATGTCCAATAATTTCAGTTAAGTGAATATGTTTTAATAACCGTTGTTTGGTATGCTGGGGGAATTTGAATTGAATATATGTGGAATGTGTGCAGAGAAAGCACGTTCTATTTAAAAGGTATAGGCAGCTGTAGTTTCATCTAATTCCTACTGGTCAGAGTGGAATATATTTTTAAAATGAATTTTGTGTATGCTTGCTGCAAACTGTGAATATTTTCCATCCTACCATGGCTGTGTGACTAGGAGATTGGCTCTGATCTCTTTATCGAGGATGGTTACTTCAATTATAGTGAGTTGCAATTATAGCGATAACTGTAATGCATTTTATTGATAAA

Fln Alignment:

Contig27029___LKEKQGWRKFIAHIGPGFLVSIAYLDPGNLESDLQAGAQYKYELLWVILVASIFSLLIQSLAANLGVTTGKHLAEHYREEYPRNINYILWLLAEIAVIAADIPEVLGTAFALNMLFHIPLWXXXXXXXXXXXXXXXMQRFGIRKLEGFVALLVFTMFGCFFGEMAYAKPKADEVVKGLFVPLLKGNGATGLGISLLGAMVMPHNLFLHSALVLSRKVSPSTSGINLACRYFLIETGVALFVAFMINVAVISVAGSICFSPNIPPEQLQNCGNLDLNASAFLLKQVLGKWSSTVFAVALLASGQSSTITGTYAGQYVMQGFLNMKMKPWLRNLITRCXXXXXXXXXXXXXXXXXXXKLIIISSMILSFELPFALIPLLKFTTSQTKMGPHKNSITTLVAAWAXXXXXXXXXXXXLSTEFGKWLIHNSLPKVASVFIGLLVFPXXXXXXXXXXXXXXRREKVDTYIASGESSTQSRSNPEREL
Q9SAH8_______________VSEKKSWKNFFAYLGPGFLVSIAYIDPGNFETDLQAGAHYKYELLWIILVASCAALVIQSLAANLGVVTGKHLAEQCRAEYSKVPNFMLWVVAEIAVVACDIPEVIGTAFALNMLFSIPVWIGVLLTGLSTLILLALQKYGVRKLEFLIAFLVFTIAICFFVELHYSKPDPGEVLHGLFVPQLKGNGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSASGIKEACRFYLIESGLALMVAFLINVSVISVSGAVCNAPNLSPEDRANCEDLDLNKASFLLRNVVGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLEPWLRNLLTRCLAIIPSLIVALIGGSAGAGKLIIIASMILSFELPFALVPLLKFTSCKTKMGSHVNPMAITALTWVIGGLIMGINIYYLVSSFIKLLIHSHMKLILVVFCGILGFAGIALYLAAIAYLVFRKNRVATSLLISRDSQNVETLPRQDI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain