SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene26678

Length: 656 nt

Origin of reads: Uagpf v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene26678 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	glucose-methanol-choline (GMC) oxidoreductase-like protein [Arabidopsis thaliana] gb\|AAU05540.1\| At1g12570 [Arabidopsis thaliana] gb\|AEE28898.1\| glucose-methanol-choline (GMC) oxidoreductase-like protein [Arabidopsis thaliana]	-	-	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	80%
Blast2go	protein hothead-like	-	-	75%

Source	InterPros	Term	Type	Identity
Sma3	Glucose-methanol-choline oxidoreductase, N-terminal	IPR000172	-	-
Sma3	Flavin amine oxidase	IPR001613	-	-
Sma3	Glucose-methanol-choline oxidoreductase, C-terminal	IPR007867	-	-
Sma3	Glucose-methanol-choline oxidoreductase	IPR012132	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-
Sma3	DNA methylase, N-4 cytosine-specific, conserved site	IPR017985	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain