SustainPineDB

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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene44151

Length: 229 nt

UniGene Fasta

>uagpf_v2_unigene44151
CGTCGTGACCTTGGCTGTCACTCCTATTATGTCAATTGCAGGGAGAGGGAAGATAGACACGCATTAACAATGACAGCAGTTGCCAATGGTCTGTATTCTGTTAGTTTTCAATCACAATTGAAAACCTTACAGGCTTTCTCTATAGTTTTGTCCATGCTGCACAGCAGAGAAGAGATCCTCATTCCTCCTGGCATGCATGATAATAACAATAATAAAGTAACTGATTGCA

Ace file of the UniGene uagpf_v2_unigene44151

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene10946	1/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF3527 domain containing protein	-	-	4.0e-07	29%
FL-Next	tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice).	-	-	0.0	42%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9F781

Fln msg: Distance to subject end: 31 aas, your sequence is shorter than subject: 76 - 330

Fln protein: RRDLGCHSYYVNCREREDRHALTMTAVANGLYSVSFQSQLKTLQAFSIVLSMLHSREEILIPPGMHDNNNNKVTDC

Protein Length: 77

Fln nts: CGTCGTGACCTTGGCTGTCACTCCTATTATGTCAATTGCAGGGAGAGGGAAGATAGACACGCATTAACAATGACAGCAGTTGCCAATGGTCTGTATTCTGTTAGTTTTCAATCACAATTGAAAACCTTACAGGCTTTCTCTATAGTTTTGTCCATGCTGCACAGCAGAGAAGAGATCCTCATTCCTCCTGGCATGCATGATAATAACAATAATAAAGTAACTGATTGCA

Fln Alignment:

uagpf_mira_rep_c43912___YVNCREREDRHALTMTAVANGLYSVSFQSQLKTLQAFSIVLSMLHSREEILIPPGMH
B9F781________________FVQGRSREDKHAFSMVSFREGLYTVEFRSSIALLQAFAMCIVMLHGRRPTRTQAGVH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain