|
||||||
|
UniGene Name: uagpf_v2_unigene39248
Length: 208 nt
 UniGene Fasta
|
|---|
| >uagpf_v2_unigene39248
C |
|
Ace file of the UniGene uagpf_v2_unigene39248
|
|---|
If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
| Annotations |
|---|
| Parent Assembly | Parent UniGene | Reads (related/total) |
|---|---|---|
| SustainPine v2.0 | sp_v2.0_unigene3599 | 1/2 |
| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | leucine-rich receptor-like protein kinase [Arabidopsis thaliana] gb|AAL32758.1| Unknown protein [Arabidopsis thaliana] gb|ACN59227.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AEE28522.1| leucine-rich receptor-like protein | - | - | 1.0e-27 | 56% |
| Blast2go | receptor protein kinase clavata1 | - | - | 4.2493e-41 | 77% |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases. | EC:2.7.11.- | - | 4.2493e-41 | 77% |
| Blast2go | 2-alkenal reductase. | EC:1.3.1.74 | - | 4.2493e-41 | 77% |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | protein phosphorylation | GO:0006468 | Biological Process | 4.2493e-41 | 77% |
| Blast2go | oxidation-reduction process | GO:0055114 | Biological Process | 4.2493e-41 | 77% |
| Blast2go | receptor activity | GO:0004872 | Molecular Function | 4.2493e-41 | 77% |
| Blast2go | peptidase activity | GO:0008233 | Molecular Function | 4.2493e-41 | 77% |
| Blast2go | ATP binding | GO:0005524 | Molecular Function | 4.2493e-41 | 77% |
| Blast2go | protein serine/threonine kinase activity | GO:0004674 | Molecular Function | 4.2493e-41 | 77% |
| Blast2go | 2-alkenal reductase [NAD(P)] activity | GO:0032440 | Molecular Function | 4.2493e-41 | 77% |
| Blast2go | integral to membrane | GO:0016021 | Cellular Component | 4.2493e-41 | 77% |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Alpha/beta hydrolase fold-1 | IPR000073 | - | 0.0 | - |
| Sma3 | Protein kinase, catalytic domain | IPR000719 | - | 0.0 | - |
| Sma3 | Serine-threonine/tyrosine-protein kinase catalytic domain | IPR001245 | - | 0.0 | - |
| Sma3 | Leucine-rich repeat | IPR001611 | - | 0.0 | - |
| Sma3 | Enolpyruvate transferase domain | IPR001986 | - | 0.0 | - |
| Sma3 | Peptidase S33 | IPR002410 | - | 0.0 | - |
| Sma3 | Proline iminopeptidase | IPR005944 | - | 0.0 | - |
| Sma3 | Phosphopantetheine attachment site | IPR006162 | - | 0.0 | - |
| Sma3 | Serine/threonine-protein kinase, active site | IPR008271 | - | 0.0 | - |
| Sma3 | Leucine-rich repeat-containing N-terminal, type 2 | IPR013210 | - | 0.0 | - |
| Sma3 | Protein kinase, ATP binding site | IPR017441 | - | 0.0 | - |
| Sma3 | IPR017442 | - | 0.0 | - | |
| Sma3 | HTH domain AraC-type, conserved site | IPR018062 | - | 0.0 | - |
| Full-Lengther Next Prediction |
|---|
Fln status: unknown
Fln database: testcode
Fln msg: Non coding ORF found >= 200 nt
Test code: 0
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
