SustainPineDB

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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene35413

Length: 258 nt

UniGene Fasta

>uagpf_v2_unigene35413
CGTCGTGACCTTGGCTGTCACTCAGAGCTGGGAAAAAATGGGGAACGAGAAATTCGTGAGAGCTCTGAAGGCCATGAAGCCTCTAGGCCTTACGAGTAATGATGTATCTCCAGTCCTGAAGCGTTTGCTGAAGGTATATGACAATGAGTGGCCTCTCATAGAGGCCGAAAGCTACAGAGTTTTGGCAGATGCTGTGTTCGAGTCGCGGGAAGAACAGTTCGAGTCGCGGGAAGAAGAGGTGGAGGTAGAACACAAGAG

Ace file of the UniGene uagpf_v2_unigene35413

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene38342	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9SKN2_RICCO	-	-	5.0e-10	57%
FL-Next	sp=Histone-lysine N-methyltransferase SUVR2; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	47%
Blast2go	histone-lysine n-methyltransferase suvr2-like	-	-	6.93841e-12	69%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: sp_plants

Fln subject: Q9FNC7

Fln msg: Distance to subject end: 642 aas, your sequence is shorter than subject: 73 - 717

Fln protein: MGNEKFVRALKAMKPLGLTSNDVSPVLKRLLKVYDNEWPLIEAESYRVLADAVFESREEQFESREEEVEVEHK

Protein Length: 74

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGAGCTGGGAAAAA_-_ATGGGGAACGAGAAATTCGTGAGAGCTCTGAAGGCCATGAAGCCTCTAGGCCTTACGAGTAATGATGTATCTCCAGTCCTGAAGCGTTTGCTGAAGGTATATGACAATGAGTGGCCTCTCATAGAGGCCGAAAGCTACAGAGTTTTGGCAGATGCTGTGTTCGAGTCGCGGGAAGAACAGTTCGAGTCGCGGGAAGAAGAGGTGGAGGTAGAACACAAGAG

Fln Alignment:

uagpf_mira_c23001___RALKAMKPLGLTSNDVSPVLKRLLKVYDNEWPLIEAESYRVLADAV
Q9FNC7________________KAFMAMRAMGIEDARVKPVLKNLLALYEKNWELIAEDNYRVLADAI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain