SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene19813

Length: 989 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene19813

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene24355	95/113
SustainPine v2.0	sp_v2.0_unigene24427	1/113
SustainPine v2.0	sp_v2.0_unigene24440	2/113
SustainPine v2.0	sp_v2.0_unigene26581	7/113
SustainPine v2.0	sp_v2.0_unigene82876	2/113

Source	Descriptions	Term	Type	Identity
AutoFact	21 kD protein n=1 Tax=Pinus radiata RepID=O65011_PINRA	-	-	93%
FL-Next	tr=21 kD protein; Pinus radiata (Monterey pine) (Pinus insignis).	-	-	93%
Blast2go	21 kda protein	-	-	65%

Source	InterPros	Term	Type	e value	Identity
Sma3	Pectinesterase inhibitor	IPR006501	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 121)

Position	A %	C %	G %	T %	Probability
63		33		66	0.997452
65			66	33	0.997452
66		33	66		0.997452
67			33	66	0.997452
69		66	33		0.997452
70	33		66		0.997452
75	33	33	33		0.997753
81	33			66	0.997452
82		33		66	0.997452
84		33		66	0.997452
85	33	66			0.997452
93	33	33	33		0.997753
101	33			66	0.997452
117		75		25	0.996473
119	75		25		0.996473
125		25		75	0.996473
127	75			25	0.996473
128		75		25	0.996473
132		25		50	0.995533
135		80		20	0.995493
136	60	20	20		0.99255
137	80			20	0.995493
140	40		60		1.0
141		20		80	0.995493
142		20		80	0.995493
145	80		20		0.995493
146		20	80		0.995493
147		20		80	0.995493
149	80		20		0.995493
155		60	20	20	0.99255
159		80		20	0.995493
183		80		20	0.995493
209	80		20		0.995493
245	80	20			0.995493
249		20		80	0.995493
266		75		25	1.0
267	25			75	1.0
268	12	87			0.992554
269		10		90	0.90298
270		20	80		0.999996
271	20	20		60	0.999999
272		10	90		0.90298
274			10	90	0.90298
277			10	90	0.90298
279		90	10		0.90298
280	10		90		0.90298
283		10		90	0.90298
284	10			90	0.90298
288	10	90			0.90298
293	10		90		0.90298
314		11		88	0.923564
316			88	11	0.923564
317	88			11	0.923564
333		11		88	0.923564
365	87		12		0.992554
367		12	87		0.992554
370		12		87	0.992554
371	12			87	0.992554
395	87		12		0.992554
406		87		12	0.992554
418	92	7			0.999664
421	90	4		4	0.938371
423	93	4	2		0.983471
424	90	2	6		0.999997
425	90			9	1.0
428		6	90	2	0.999997
430			93	4	0.983471
431	2		93	4	0.983471
432		95	4		0.996599
433	4		90	4	0.938371
437	93	6			0.999999
451	48		51		1.0
468		5		89	0.97549
470		5	82	11	1.0
471	81		6	12	1.0
472		48	51		1.0
474	86	13			1.0
477			7	92	0.999532
479		92	7		0.999532
482	92			8	0.999718
483	92		8		0.999718
485		8		92	0.999718
486	8	92			0.999718
487			8	92	0.999718
489		8		92	0.999718
490	32		68		1.0
492	92		8		0.999718
494			91	8	0.999766
497	66			33	1.0
498		8		91	0.999766
503	27	72			1.0
511	9		90		0.999842
527	5	50		45	1.0
547	47		52		1.0
562		38		61	1.0
579	85		14		0.999981
598		21		78	1.0
599		71	28		1.0
607	69		30		1.0
618	37	50			1.0
626	50		50		1.0
628		12		87	0.992554
647		70		30	1.0
654	60		30	10	1.0
656	90		10		0.90298
657	90	10			0.90298
660	90			10	0.90298
661		10	90		0.90298
662	10			90	0.90298
664	30			70	1.0
666	90	10			0.90298
730	83			16	0.994512
814	83	16			0.994512
815			20	80	0.995493
817		20		80	0.995493
818	80		20		0.995493
822		20	80		0.995493
823		20		80	0.995493
826			20	80	0.995493
831		80		20	0.995493
843	20	80			0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain