SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene19658

Length: 834 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene19658

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene17569	82/86
SustainPine v2.0	sp_v2.0_unigene78624	3/86

Source	Descriptions	Term	Type	Identity
AutoFact	Endomembrane family protein 70 n=4 Tax=Arabidopsis RepID=Q9FYQ8_ARATH	-	-	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	98%
Blast2go	transmembrane 9 superfamily member 4-like	-	-	85%

Source	GOs	Term	Type	e value	Identity
Blast2go	Golgi apparatus	GO:0005794	Cellular Component	0.0	85%

Source	InterPros	Term	Type	e value	Identity
Sma3	Nonaspanin (TM9SF)	IPR004240	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 49)

Position	A %	C %	G %	T %	Probability
96	66		33		0.997452
99	33			66	0.997452
100		33		66	0.997452
101		33		66	0.997452
106	66	33			0.997452
109	33			66	0.997452
118		14		85	0.993533
121	85	14			0.993533
122			14	85	0.993533
126		14		85	0.993533
127		14		85	0.993533
128		85		14	0.993533
130		85	14		0.993533
131		85	14		0.993533
132		14		85	0.993533
137		14	85		0.993533
139		14		85	0.993533
140	14		85		0.993533
169			10	90	0.90298
173	90		10		0.90298
185	10		90		0.90298
186		10		90	0.90298
187			90	10	0.90298
188		10	90		0.90298
223	83		16		0.999991
228		16	83		0.999991
231		83		16	0.999991
232			16	83	0.999991
239	76	5			1.0
240		11	5	64	1.0
242		17		82	1.0
243	76		23		1.0
244			17	70	1.0
245	76	17	5		1.0
247		5	17	76	1.0
249		17		82	1.0
250	17			82	1.0
254	9		4	80	0.999537
256			9	90	0.999872
389		3		96	0.993591
415			3	96	0.990463
418			1	94	0.941977
427	89			1	1.0
485	94	5			0.999995
486		5	94		0.999996
489			5	94	0.999996
490	94	5			0.999996
496	3			96	0.991164
721	12			75	0.975346

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain