SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene19300

Length: 679 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene19300

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene15862	5/8

Source	Descriptions	Term	Type	Identity
AutoFact	USP family protein n=3 Tax=Andropogoneae RepID=B6TYX3_MAIZE	-	-	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	universal stress protein 1	-	-	81%

Source	InterPros	Term	Type	Identity
Sma3	Rossmann-like alpha/beta/alpha sandwich fold	IPR014729	-	-
Sma3	Universal stress protein A	IPR006015	-	-
Sma3	UspA	IPR006016	-	-

Full-Lengther Next Prediction

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
43			66	33	0.997452
44		33	66		0.997452
46	66			33	0.997452
49	66	33			0.997452
50		33	66		0.997452
55	66	33			0.997452
58		66		33	0.997452
59		33	66		0.997452
61		33	66		0.997452
62			66	33	0.997452
102	50	50			1.0
104		50		50	1.0
105	50	50			1.0
107	50			50	1.0
109	50		50		1.0
118	50			50	1.0
122		50	50		1.0
124	50	50			1.0
125	50			50	1.0
126	50	50			1.0
127	50		50		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain