SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene19214

Length: 985 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene19214

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene7518	39/43
SustainPine v2.0	sp_v2.0_unigene61670	1/43

Source	Descriptions	Term	Type	Identity
AutoFact	Cupin_5 domain containing protein	-	-	44%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	92%
Blast2go	protein	-	-	76%

Full-Lengther Next Prediction

SNPs (tot: 55)

Position	A %	C %	G %	T %	Probability
16		20		80	0.995493
21		80	20		0.995493
23		80	20		0.995493
29		20		80	0.995493
31			20	20	0.99255
32			20	80	0.995493
35	80		20		0.995493
36	80			20	0.995493
37	80	20			0.995493
38	20			80	0.995493
72		80	20		0.995493
82	20	80			0.995493
100	20			80	0.995493
101	80	20			0.995493
104	71		28		1.0
112		28	71		1.0
113	57			42	1.0
114	57			42	1.0
116		28	42	28	1.0
117		42	57		1.0
119		14	85		0.993533
120	14			85	0.993533
121		85		14	0.993533
123	28	71			1.0
126	71			28	1.0
127		28		71	1.0
128	28			71	1.0
138			15	84	0.999986
139	15			84	0.999986
148		84		15	0.999986
150	84			15	0.999986
151	84	15			0.999986
187		86		13	0.999973
205		11		88	0.999952
207			88	11	0.999952
208		11	88		0.999952
213		11		88	0.999952
214	88			11	0.999952
215	88			11	0.999952
216	88		11		0.999952
219	88			11	0.999952
220	88	11			0.999952
224	11		88		0.999952
229	52		47		1.0
386	15		84		0.999986
426			10	89	0.999919
453		5		85	0.999793
469		64		35	1.0
503			15	84	0.999986
594	88		11		0.923564
668			25	75	0.996473
847	50		50		1.0
910	20			80	0.995493
920			20	80	0.995493
949	50			50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain