SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene19049

Length: 871 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene19049

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene15862	34/38

Source	Descriptions	Term	Type	Identity
AutoFact	USP family protein n=3 Tax=Andropogoneae RepID=B6TYX3_MAIZE	-	-	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	universal stress protein 1	-	-	81%

Source	InterPros	Term	Type	Identity
Sma3	Rossmann-like alpha/beta/alpha sandwich fold	IPR014729	-	-
Sma3	Universal stress protein A	IPR006015	-	-
Sma3	UspA	IPR006016	-	-

Full-Lengther Next Prediction

SNPs (tot: 50)

Position	A %	C %	G %	T %	Probability
217		88	11		0.923564
218			22	44	1.0
219		11	44	44	1.0
220		11	77	11	0.968132
222		88	11		0.923564
224		22	77		0.999999
225	77			11	0.968132
228	88			11	0.923564
229	11		77	11	0.968132
232	88			11	0.923564
233		15	84		0.999986
372	84		15		0.999986
431	88	11			0.923564
434	88	11			0.923564
435	88		11		0.923564
437	88		11		0.923564
438	11		88		0.923564
442	80			20	0.999996
443		10	90		0.90298
446	10			90	0.90298
447		20		80	0.999996
448	90	10			0.90298
449		10		90	0.90298
451		10	90		0.90298
452	10		90		0.90298
453			90	10	0.90298
456		10	90		0.90298
458		10		90	0.90298
459			90	10	0.90298
461	10		90		0.90298
470	40		60		1.0
482	60	40			1.0
654			73	26	1.0
663	85	14			0.993533
664	85		14		0.993533
665	85			14	0.993533
666	85		14		0.993533
668	85	14			0.993533
670	85			14	0.993533
671	85			14	0.993533
672	85		14		0.993533
674	83	16			0.994512
675	83			16	0.994512
676	83		16		0.994512
677		83		16	0.994512
680	16			83	0.994512
681		16		83	0.994512
683		16	83		0.994512
684	16		83		0.994512
865	66		33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain