SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene18577

Length: 510 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene18577

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene8204	45/47

Source	Descriptions	Term	Type	e value	Identity
AutoFact	40S ribosomal protein S25 [Glycine max]	-	-	1.0e-27	88%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%
Blast2go	40s ribosomal protein	-	-	2.52778e-36	96%

Source	GOs	Term	Type	e value	Identity
Blast2go	ribosome	GO:0005840	Cellular Component	2.52778e-36	96%

Source	InterPros	Term	Type	e value	Identity
Sma3	Ribosomal protein S25	IPR004977	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 62)

Position	A %	C %	G %	T %	Probability
66	75		25		0.996473
67	75			25	0.996473
70			25	75	0.996473
74	75	25			0.996473
76	75			25	0.996473
77	75		25		0.996473
83	25			75	0.996473
86	25			75	0.996473
98	77	22			0.999999
101	77		22		0.999999
102		77		22	0.999999
103	77		22		0.999999
105		22	77		0.999999
109	77		22		0.999999
110			22	77	0.999999
111		22		77	0.999999
112	77			22	0.999999
113		77	22		0.999999
114	77			22	0.999999
116	22	77			0.999999
123			10	90	0.90298
125		10		90	0.90298
126	90		10		0.90298
128		90	10		0.90298
130		10	90		0.90298
131	90	10			0.90298
133	90			10	0.90298
136		10		90	0.90298
140			90	10	0.90298
141		10	90		0.90298
143		10		90	0.90298
145	90	10			0.90298
194		86	13		0.999973
196	66	13			1.0
198		86	13		0.999973
199	66		20	13	1.0
200		13	66	20	1.0
201	13		86		0.999973
202	86	13			0.999973
203		20		80	1.0
204		33	66		1.0
205	80			20	1.0
207			20	80	1.0
208			20	80	1.0
219	20	80			1.0
281	94	5			0.998894
282			5	94	0.998894
287	94			5	0.998894
288	94		5		0.998894
290	94	5			0.998894
291		5	94		0.998894
294			5	94	0.998894
296	94	5			0.998894
300	94	5			0.998894
301	6			93	0.99903
302		6	93		0.99903
305		6	93		0.99903
328	45		54		1.0
440			20	80	0.999996
470			22	77	0.999999
494	22		77		0.999999
499	75		25		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain