SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene17691

Length: 712 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene17691

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene26991	1/11
SustainPine v2.0	sp_v2.0_unigene78571	10/11

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative universal stress protein [Mirabilis jalapa]	-	-	2.0e-20	39%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	72%
Blast2go	universal stress protein	-	-	0.0	64%

Source	InterPros	Term	Type	Identity
Sma3	Universal stress protein A	IPR006015	-	-
Sma3	UspA	IPR006016	-	-
Sma3	Rossmann-like alpha/beta/alpha sandwich fold	IPR014729	-	-

Full-Lengther Next Prediction

SNPs (tot: 59)

Position	A %	C %	G %	T %	Probability
31		33	66		0.997452
32			33	66	0.997452
34			33	66	0.997452
36	66	33			0.997452
37	66	33			0.997452
39		66		33	0.997452
41		66	33		0.997452
42	66	33			0.997452
43			66	33	0.997452
48		33	66		0.997452
50	66	33			0.997452
211	75	25			0.996473
212	75		25		0.996473
222		75		25	0.996473
223		75	25		0.996473
225		25	75		0.996473
228	75			25	0.996473
232	25	25	50		0.995533
233	50		25	25	0.995533
234		25	75		0.996473
236	25	75			0.996473
271		20	80		0.995493
272		80	20		0.995493
275	20	80			0.995493
278	80	20			0.995493
279	80			20	0.995493
280	80			20	0.995493
281	80		20		0.995493
283		20	80		0.995493
285	80		20		0.995493
287	80	20			0.995493
293		20	80		0.995493
331			20	80	0.995493
333	80		20		0.995493
336	80	20			0.995493
337		20	80		0.995493
338			80	20	0.995493
339	80			20	0.995493
340		80	20		0.995493
346	16			83	0.994512
347		16		83	0.994512
348			83	16	0.994512
349		16	83		0.994512
350	16	83			0.994512
353		14		85	0.993533
357	85	14			0.993533
362		14		85	0.993533
363		14		85	0.993533
364	85			14	0.993533
366			14	85	0.993533
368		12		87	0.992554
373		87	12		0.992554
374	87			12	0.992554
376	12	87			0.992554
377	87			12	0.992554
381	87		12		0.992554
383	87			12	0.992554
386	12		87		0.992554
389	12	87			0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain