SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene16681

Length: 1025 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene16681

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene22450	81/82

Source	Descriptions	Term	Type	e value	Identity
AutoFact	similar to ATP synthase subunit H protein [Solanum lycopersicum]	-	-	1.0e-24	74%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	97%
Blast2go	v0 subunit e	-	-	5.38002e-39	86%

Source	GOs	Term	Type	e value	Identity
Blast2go	vacuole	GO:0005773	Cellular Component	5.38002e-39	86%

Source	InterPros	Term	Type	e value	Identity
Sma3	ATPase, V0 complex, subunit E	IPR008389	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 48)

Position	A %	C %	G %	T %	Probability
70		80		20	0.995493
72	20			80	0.995493
79		20		80	0.995493
142	71	14			0.984337
143			14	85	0.993533
144			14	85	0.993533
145	71	14	14		0.984337
146		14	85		0.993533
149	14			14	0.984337
152	71	14		14	0.984337
153	14		85		0.993533
154	85		14		0.993533
156		85		14	0.993533
159		14		85	0.993533
162	14	85			0.993533
255	91		8		1.0
258			8	91	1.0
260		91	8		1.0
266		91		8	1.0
267	91		8		1.0
270			91	8	1.0
272	91			2	0.993509
273	91	2			0.993509
276	2			91	0.993509
278		5	91	2	0.993509
289	11			88	1.0
359	91	6		2	0.999994
362	91	2	6		0.999994
365	6	93			0.999998
366	2	6		91	0.999995
367		6	93		0.999999
372	93	6			0.999999
375	93			2	0.98137
378	2	4		93	0.983471
380		4	93	2	0.983471
395	93	4	2		0.979066
398	93		6		0.999999
399		93		6	0.999999
400	93	2	4		0.983471
404	92	4			0.98868
405	92	2		5	0.990091
406	95			5	0.997749
407	95		5		0.997749
408		95	5		0.997749
467		5		94	0.998744
476	94		5		0.998744
479			5	94	0.998894
547	91			8	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain