SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene16089

Length: 915 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene16089

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene19670	23/23

Source	Descriptions	Term	Type	Identity
AutoFact	Serine/threonine-protein phosphatase PP2A-3 catalytic subunit n=30 Tax=Embryophyta RepID=PP2A3_ORYSJ	-	-	89%
FL-Next	sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	97%
Blast2go	protein phosphatase 2a catalytic subunit	-	-	96%

Source	InterPros	Term	Type	e value	Identity
Sma3	Metallophosphoesterase domain	IPR004843	-	0.0	-
Sma3	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	IPR006186	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 32)

Position	A %	C %	G %	T %	Probability
407		10	90		0.90298
408	90		10		0.90298
410		10	90		0.90298
412	90			10	0.90298
413	90		10		0.90298
414	10			90	0.90298
415		10	90		0.90298
417	90			10	0.90298
418	90			10	0.90298
420			10	90	0.90298
421	90	10			0.90298
423			11	88	0.923564
425		11	88		0.923564
429	11		88		0.923564
484			66	33	0.997452
550		20		80	0.995493
553		20		80	0.995493
558		20	80		0.995493
562			60	40	1.0
563			20	80	0.995493
564		20	20	60	0.99255
566		66	16	16	0.988813
567		16	50		1.0
569	83		16		0.994512
572	16		83		0.994512
573		16	83		0.994512
576		16	83		0.994512
577	16	83			0.994512
705			80	20	0.995493
707	80			20	0.995493
708	80	20			0.995493
709			20	80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain