SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene14086

Length: 910 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene14086

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene14349	30/34
SustainPine v2.0	sp_v2.0_unigene22352	1/34
SustainPine v2.0	sp_v2.0_unigene35600	2/34

Source	Descriptions	Term	Type	e value	Identity
AutoFact	21 kD protein n=1 Tax=Pinus radiata RepID=O65011_PINRA	-	-	3.99931e-42	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	51%
Blast2go	21 kda protein	-	-	0.0	57%

Source	InterPros	Term	Type	e value	Identity
Sma3	Pectinesterase inhibitor	IPR006501	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 28)

Position	A %	C %	G %	T %	Probability
196	22	77			0.999999
208	81	18			0.999994
219	85		14		0.999981
222	85			14	0.999981
226	85			14	0.999981
417		26		73	1.0
650		20	80		0.995493
654		20	80		0.995493
655	20		80		0.995493
656	80	20			0.995493
658		20	80		0.995493
659	20		80		0.995493
693	83	16			0.994512
694	83			16	0.994512
695	83			16	0.994512
696	83		16		0.994512
697		83	16		0.994512
698		16	83		0.994512
704		16	83		0.994512
705	16	83			0.994512
722		87	12		0.992554
728		87	12		0.992554
729	12			87	0.992554
731		12		87	0.992554
739	87			12	0.992554
742		12	87		0.992554
743	12		62		1.0
748	12	87			0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain