SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene13431

Length: 983 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene13431

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene21923	61/64

Source	Descriptions	Term	Type	Identity
AutoFact	endomembrane family protein 70 [Arabidopsis thaliana] dbj\|BAB10022.1\| endosomal protein-like [Arabidopsis thaliana] gb\|AED93935.1\| endomembrane family protein 70 [Arabidopsis thaliana]	-	-	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	63%
Blast2go	transmembrane 9 superfamily member 4-like	-	-	86%

Source	GOs	Term	Type	e value	Identity
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	0.0	86%
Blast2go	Golgi apparatus	GO:0005794	Cellular Component	0.0	86%

Source	InterPros	Term	Type	e value	Identity
Sma3	Nonaspanin (TM9SF)	IPR004240	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 62)

Position	A %	C %	G %	T %	Probability
82			33	66	0.997452
83		66		33	0.997452
84			33	66	0.997452
85	33		33	33	0.997753
86			66	33	0.997452
87	66	33			0.997452
88	66	33			0.997452
91		66		33	0.997452
92	33		33		0.997753
94	66	33			0.997452
95	66			33	0.997452
96	66		33		0.997452
97			66	33	0.997452
99	33	66			0.997452
101	66			33	0.997452
102	66	33			0.997452
185		33	66		1.0
343	3		60	36	1.0
365		4	95		0.99692
367	95			4	0.99692
368		4	95		0.99692
373	95	4			0.99692
375		95		4	0.99692
376			4	95	0.99692
378	95	4			0.99692
379	95			4	0.99692
380	95		4		0.99692
387	4	95			0.997218
465	3			76	1.0
545		14		85	0.999981
546	85		14		0.999981
547	85			14	0.999981
548		14	85		0.999981
551		85	14		0.999981
553	85	14			0.999981
556		84	15		0.999986
557		84	15		0.999986
561	84			15	0.999986
569	83			16	0.999991
653	83	16			0.994512
655	83			16	0.994512
656		16	83		0.994512
657		83	16		0.994512
659			16	83	0.994512
660	16	83			0.994512
661		16		83	0.994512
663	83			16	0.994512
667		16	83		0.994512
670	83			16	0.994512
673	83			16	0.994512
674		16	83		0.994512
715	83		16		0.994512
719		87	12		0.992554
721			12	87	0.992554
723			12	87	0.992554
725		12		87	0.992554
729			12	87	0.992554
732	87			12	0.992554
733		87	12		0.992554
739	87	12			0.992554
740	87			12	0.992554
742	12	87			0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain