SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene13040

Length: 986 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene13040

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene6042	15/15

Source	Descriptions	Term	Type	Identity
AutoFact	[RTKL] COG0515 Serine/threonine protein kinase	-	-	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	74%
Blast2go	serine threonine protein kinase oxi1	-	-	61%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	0.0	61%

Source	GOs	Term	Type	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	61%
Blast2go	blue light signaling pathway	GO:0009785	Biological Process	61%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	61%
Blast2go	identical protein binding	GO:0042802	Molecular Function	61%
Blast2go	ATP binding	GO:0005524	Molecular Function	61%
Blast2go	FMN binding	GO:0010181	Molecular Function	61%

Source	InterPros	Term	Type	Identity
Sma3	PAS	IPR000014	-	-
Sma3	PAS-associated, C-terminal	IPR000700	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	AGC-kinase, C-terminal	IPR000961	-	-
Sma3	Legume lectin domain	IPR001220	-	-
Sma3	Phytochrome	IPR001294	-	-
Sma3	PAC motif	IPR001610	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	GAF domain	IPR003018	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Phytochrome, central region	IPR013515	-	-
Sma3	Phytochrome chromophore binding site	IPR013516	-	-
Sma3	PAS fold-2	IPR013654	-	-
Sma3	PAS fold-3	IPR013655	-	-
Sma3	PAS fold	IPR013767	-	-
Sma3	Phytochrome chromophore attachment domain	IPR016132	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Tubulin, conserved site	IPR017975	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NPF9

Fln msg: Distance to subject end: 30 aas, your sequence is shorter than subject: 318 - 385

Fln protein: MCVECICMKCRMDVIESAESVNEFKLVRALGHGDMGTVYLATHVTSGKPVAMKVMSKELMQKKRSHKRARTEKEILQKLDHPFLPKLFTKFESESHSFLLMSYCSGGDLNTLRQKQKNGRFSESAARFYAAEVVLALEYLHQHGILYRDLKPENILLQADGHIMITDFDLSLIINNPRGECKTKYKSRFWHLNGRNEAAAYEQSHSFVGTEEYVAPEILWGKGHGIAVDWWAFGILVYEMVNGKTPFKGLTRKETFYNILCKEPPQLSQPSRPLQDLLQRLLVKEPTLRLGFKCGAQEIKNHEFFEGVRWDELEYVYR

Protein Length: 319

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAGATTTAG_-_ATGTGTGTTGAGTGTATATGCATGAAGTGTAGGATGGACGTCATTGAATCCGCAGAGTCTGTGAACGAATTCAAGCTTGTCAGAGCGCTGGGCCATGGCGACATGGGGACTGTGTATCTGGCAACGCATGTGACCAGCGGGAAGCCTGTGGCCATGAAGGTAATGAGCAAGGAGCTTATGCAGAAGAAGAGGAGCCACAAAAGGGCGCGGACGGAGAAGGAGATTTTGCAGAAGCTGGACCATCCCTTCTTGCCCAAGCTTTTCACAAAGTTTGAGTCGGAAAGCCACTCTTTTCTGCTCATGAGCTACTGCTCCGGAGGGGACCTCAATACGCTCAGGCAAAAGCAGAAGAACGGGAGGTTCTCCGAGTCTGCGGCCAGATTCTATGCAGCAGAAGTTGTGCTTGCACTAGAATATTTGCACCAGCATGGAATTTTGTACAGAGACTTGAAACCTGAAAACATATTGCTTCAAGCAGATGGGCATATCATGATCACTGATTTCGATCTCTCGCTTATCATCAACAATCCACGAGGAGAGTGTAAGACAAAGTATAAATCCAGGTTTTGGCATTTGAATGGCAGAAACGAAGCAGCAGCTTACGAGCAATCTCATTCGTTTGTAGGCACAGAAGAGTATGTTGCCCCAGAAATCTTGTGGGGCAAGGGCCATGGCATTGCAGTGGATTGGTGGGCTTTTGGCATATTGGTGTATGAGATGGTGAATGGGAAGACCCCGTTTAAGGGGTTGACTAGGAAAGAAACTTTTTACAACATATTATGCAAAGAGCCACCGCAGCTCTCACAACCTTCCAGACCCCTCCAAGACCTACTCCAACGATTGTTGGTGAAGGAGCCTACTCTTAGATTGGGATTCAAGTGTGGTGCTCAAGAGATTAAAAATCATGAATTCTTTGAGGGTGTTAGATGGGATGAGTTAGAATATGTGTATAGA

Fln Alignment:

Contig13040___MKCRMDVIESAESVNEFKLVRALGHGDMGTVYLATHVTSGKPVAMKVMSKELMQKKRSHKRARTEKEILQKLDHPFLPKLFTKFESESHSFLLMSYCSGGDLNTLRQKQKNGRFSESAARFYAAEVVLALEYLHQHGILYRDLKPENILLQADGHIMITDFDLSLIINNPR------------GECKTKYKS---------------------------------RFWHLNGRNEAAAYEQSHSFVGTEEYVAPEILWGKGHGIAVDWWAFGILVYEMVNGKTPFKGLTRKETFYNILCKEXXXXXXXXXXXXXXXXXXXVKEPTLRLGFKCGAQEIKNHEFFEGVRWDELEYVYR
A9NPF9________________MEFRMNVIESAQSVDEFTPIRTLGHGDMGTVYLAKHMTSGKPVAMKVMSKELMQKKRSHKRAWMEKEILQKLDHPFLPKLFTKFESKNHSFLLMSYCSGGDLNTLRQRQKDRKFSESAARFYAAEVVLALEYLHQHGILYRDLKPENILLQADGHIMITDFDLSLMINNSQESRAKDSYRDQNGSCKKKTKSFLAKLNPGHVGAKDCMNASAMITTKQDDSAKETSFCHLDGRKE-SVYEQAHSFVGTEEYVAPEILWGKGHGIAVDWWAFGVLLYEMVYGKTPFKGCNRKETFYNILCKEPPQLSEHSSPLKDLLRRLLVKEPTLRLGFNSGAQEIKNHEFFEGVRWDELEYVSR

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
191	20		80		0.995493
221			80	20	0.995493
230		80		20	0.995493
233	20		80		0.995493
240		20		80	0.995493
244		80		20	0.995493
249	20		80		0.995493
273		25		75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain