SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene11927

Length: 719 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene11927

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene16888	2/28
SustainPine v2.0	sp_v2.0_unigene22793	14/28
SustainPine v2.0	sp_v2.0_unigene61780	11/28

Source	Descriptions	Term	Type	Identity
AutoFact	Putative phosphatase n=4 Tax=Solanum lycopersicum RepID=Q8GRL8_SOLLC	-	-	61%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	64%
Blast2go	inorganic pyrophosphatase 2-like	-	-	76%

Source	InterPros	Term	Type	Identity
Sma3	HAD-superfamily hydrolase, subfamily IB, PSPase-like	IPR006383	-	-
Sma3	Pyridoxal phosphate phosphatase-related	IPR006384	-	-
Sma3	Phosphatase PHOSPHO-type	IPR016965	-	-

Full-Lengther Next Prediction

SNPs (tot: 56)

Position	A %	C %	G %	T %	Probability
54		10	90		0.90298
57			10	90	0.90298
59			10	90	0.90298
61	90	10			0.90298
65	90		10		0.90298
66		10		90	0.90298
68		90	10		0.90298
69	90			10	0.90298
70		10		90	0.90298
71	10			90	0.90298
72		10		90	0.90298
75	10	90			0.90298
79		90		10	0.90298
119	60		40		1.0
147		87	12		0.999964
151	87			12	0.999964
153	87		12		0.999964
154	87		12		0.999964
155		12		87	0.999964
156	25			75	1.0
158	87			12	0.999964
160	12			87	0.999964
161		12	87		0.999964
163	12		87		0.999964
246		21		78	1.0
258	80		20		0.999996
297		22		77	0.999999
339			14	85	0.993533
420		66		33	1.0
433		75		25	1.0
435	75		25		1.0
437			87	12	0.992554
438	87	12			0.992554
439		87	12		0.992554
440		75		25	1.0
442			71	28	1.0
443		71	28		1.0
444			28	71	1.0
446		71		28	1.0
447	71		28		1.0
448	71			28	1.0
449		28		71	1.0
453		28		71	1.0
454	28	71			1.0
471	80		20		0.999996
476			90	10	0.90298
493			20	10	0.999998
494		10	90		0.90298
495	10		90		0.90298
512	11		88		0.923564
527		10		90	0.90298
532	10			90	0.90298
548		90		10	0.90298
628			83	16	0.994512
629	83			16	0.994512
633		83		16	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain