SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene53505

Length: 400 nt

UniGene Fasta

>uagpf_v2_unigene53505
CGTCGTGACCTTGGCTGTCACTCAATCTTCAACTGGTACACATGCACTTTTCATTATGAGAAGGATTCCACGCAAGCGTCATGTGGCTTCCAAGGAGTCGTCAGTTAATATCCATATTCACGGTAGAAAGGCTACTCTACCAAGGGATTGAGCAGATCTCTTCTCTGAACCTTCAAAAGAACCCTCCTCCAACTCCTTTTACTTTGTCTGTTTAACGATTGAAAATGGGGGACTGCGACGAGCTGAGTGAATTTCTTTCTTCTGCTGTGGAGGTCGCAAAAAGAGCTGGGGAGATGATTGGGACAAATTTTTACAAAGAGAAATCCGTGGAACACAAAGGAAAGGTAGATTTAGTAACAGAGACTGATAAGGCCTGTTCGGAGCTTGCGTTCCAGTTCCT

Ace file of the UniGene uagpf_v2_unigene53505

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene60258	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	3.1.2 inositol monophosphatase n=3 Tax=Phaseoleae RepID=C1LZ50_PHAVU	-	-	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	l-galactose-1-phosphate phosphatase	-	-	84%

Source	ECs	Term	Type	e value	Identity
Blast2go	Inositol-phosphate phosphatase.	EC:3.1.3.25	-	0.0	84%

Source	KEGGs	Term	Identity
Blast2go	Inositol phosphate metabolism	00562	84%
Blast2go	Metabolic pathways	01100	84%
Blast2go	Biosynthesis of secondary metabolites	01110	84%
Blast2go	Phosphatidylinositol signaling system	04070	84%

Source	GOs	Term	Type	Identity
Blast2go	response to cold	GO:0009409	Biological Process	84%
Blast2go	L-ascorbic acid biosynthetic process	GO:0019853	Biological Process	84%
Blast2go	inositol biosynthetic process	GO:0006021	Biological Process	84%
Blast2go	L-galactose-1-phosphate phosphatase activity	GO:0010347	Molecular Function	84%
Blast2go	inositol monophosphate 1-phosphatase activity	GO:0008934	Molecular Function	84%
Blast2go	plasma membrane	GO:0005886	Cellular Component	84%
Blast2go	response to karrikin	GO:0080167	Biological Process	84%

Source	InterPros	Term	Type	e value	Identity
Sma3	Inositol monophosphatase	IPR000760	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NP29

Fln msg: Distance to subject end: 212 aas, your sequence is shorter than subject: 58 - 271

Fln protein: MGDCDELSEFLSSAVEVAKRAGEMIGTNFYKEKSVEHKGKVDLVTETDKACSELAFQF

Protein Length: 59

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATCTTCAACTGGTACACATGCACTTTTCATTATGAGAAGGATTCCACGCAAGCGTCATGTGGCTTCCAAGGAGTCGTCAGTTAATATCCATATTCACGGTAGAAAGGCTACTCTACCAAGGGATTGAGCAGATCTCTTCTCTGAACCTTCAAAAGAACCCTCCTCCAACTCCTTTTACTTTGTCTGTTTAACGATTGAAA_-_ATGGGGGACTGCGACGAGCTGAGTGAATTTCTTTCTTCTGCTGTGGAGGTCGCAAAAAGAGCTGGGGAGATGATTGGGACAAATTTTTACAAAGAGAAATCCGTGGAACACAAAGGAAAGGTAGATTTAGTAACAGAGACTGATAAGGCCTGTTCGGAGCTTGCGTTCCAGTTCCT

Fln Alignment:

uagpf_mira_rep_c78621___MGDCDELSEFLSSAVEVAKRAGEMIGTNFYKEKSVEHKGKVDLVTETDKACSELAFQF
A9NP29________________MGDCDELSGFLSSAVEVAKRAGEMIATNFYKEKSVEHKGKVDLVTETDKACEELAFQF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain