SustainPineDB

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Assembly info
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene18133

Length: 172 nt

UniGene Fasta

>biog2_v2.0_unigene18133
CAGTGCAGGGAGAAGTGGGACAAGTTGATGGCTGCCTATAAGGATGTCATAGATGGGAAAANGAAGAAGGCGATCTTTCCATTTTGTGGAACTGAGGGCTATTGTTGAGGGAGGCCTGATGAGGGGAAATTCAAATGAGTCGATGCCTTGACATATGAAATGGATTGATCTG

Ace file of the UniGene biog2_v2.0_unigene18133

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene14861	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	64%
Blast2go	protein	-	-	1.19909e-40	61%

Source	InterPros	Term	Type	e value	Identity
Sma3	SANT/Myb domain	IPR001005	-	0.0	-
Sma3	Myb-like domain	IPR017877	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NRE1

Fln msg: your sequence is shorter than subject: 36 - 378

Fln protein: QCREKWDKLMAAYKDVIDGKKKKAIFPFCGTEGYC*

Protein Length: 37

Fln nts: CAGTGCAGGGAGAAGTGGGACAAGTTGATGGCTGCCTATAAGGATGTCATAGATGGGAAAAaGAAGAAGGCGATCTTTCCATTTTGTGGAACTGAGGGCTATTGTTGA___GGGAGGCCTGATGAGGGGAAATTCAAATGAGTCGATGCCTTGACATATGAAATGGATTGATCTG

Fln Alignment:

biogeco2_mira_c17072___QCREKWDKLMAAYKDVIDGKKKKAIFPF
A9NRE1__________________QCREKWDKLMAEFKDVSDGKRDRSESPY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain