SustainPineDB

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Assembly info
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene15984

Length: 423 nt

UniGene Fasta

>biog2_v2.0_unigene15984
TCTCCTATCGTATCCACTGTAGAGAGTGATGTTGAGAGGCCTGTTGAGTCATCTTCATCTTTAGAGAAAATCAATAAAGAGTGCACAGGTGGAAATGCAGACATTGTTCATGCACCTCTTGGTTTATTTCCTCGTCCATGGCCACCTAATACAGATACCTCCAGCGGAAGCCAGTTGTTGAAAGTGTTAGATAATTTTCGACTTCTGGGACGAGTTATGGCAAAAGCTCTACAAGATGGTCGACTCCTAGATTTACCTCTCTCAACAGCTTTTTANAAACTCATCCTTGGACAGGAACTTGATTTATATGATATTTTATCTTTTGATCCTGAGCTTGGAAAAATATTGCTAGAAATGCAAGCCCTTGTTCTAAGAGCATTTCTTGGAGCCAGGTCAGGCGATAATAGGAAAGCAATATCTGAA

Ace file of the UniGene biog2_v2.0_unigene15984

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene14756	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6	-	-	0.0	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	60%

Source	InterPros	Term	Type	Identity
Sma3	Armadillo	IPR000225	-	-
Sma3	HEAT	IPR000357	-	-
Sma3	HECT	IPR000569	-	-
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LKY6

Fln msg: Distance to subject end: 220 aas, your sequence is shorter than subject: 141 - 656

Fln protein: SPIVSTVESDVERPVESSSSLEKINKECTGGNADIVHAPLGLFPRPWPPNTDTSSGSQLLKVLDNFRLLGRVMAKALQDGRLLDLPLSTAF*KLILGQELDLYDILSFDPELGKILLEMQALVLRAFLGARSGDNRKAISE

Protein Length: 142

Fln nts: TCTCCTATCGTATCCACTGTAGAGAGTGATGTTGAGAGGCCTGTTGAGTCATCTTCATCTTTAGAGAAAATCAATAAAGAGTGCACAGGTGGAAATGCAGACATTGTTCATGCACCTCTTGGTTTATTTCCTCGTCCATGGCCACCTAATACAGATACCTCCAGCGGAAGCCAGTTGTTGAAAGTGTTAGATAATTTTCGACTTCTGGGACGAGTTATGGCAAAAGCTCTACAAGATGGTCGACTCCTAGATTTACCTCTCTCAACAGCTTTTTAaAAACTCATCCTTGGACAGGAACTTGATTTATATGATATTTTATCTTTTGATCCTGAGCTTGGAAAAATATTGCTAGAAATGCAAGCCCTTGTTCTAAGAGCATTTCTTGGAGCCAGGTCAGGCGATAATAGGAAAGCAATATCTGAA

Fln Alignment:

biogeco2_mira_c13500___KINKECTGGNADIVHAPLGLFPRPWPPNTDTSSGSQLLKVLDNFRLLGRVMAKALQDGRLLDLPLSTAF*KLILGQELDLYDILSFDPELGKILLEMQALVLR-AFLGARSGDNRKAISE
B8LKY6__________________EVSKIPTVETEEFVQSPQGLFPRPWPPNADSLQGSQFSKAINYFHLLGQVMAKALQDGRLLDLPLSTAFYKLVLMQELDLFDIQSFDRELGTTLQEMDAFVRRKQFLESLDDDNGKALSD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain