SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene7523

Length: 765 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene7523 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18440	5/5

Source	Descriptions	Term	Type	Identity
AutoFact	dihydrolipoamide acetyltransferase [Arabidopsis thaliana]	-	-	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	85%
Blast2go	dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase mitochondrial-like	-	-	81%

Source	GOs	Term	Type	Identity
Blast2go	copper ion binding	GO:0005507	Molecular Function	81%
Blast2go	transferase activity	GO:0016740	Molecular Function	81%
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	81%
Blast2go	mitochondrion	GO:0005739	Cellular Component	81%

Source	InterPros	Term	Type	Identity
Sma3	2-oxo acid dehydrogenase, lipoyl-binding site	IPR003016	-	-
Sma3	2-oxoacid dehydrogenase acyltransferase, catalytic domain	IPR001078	-	-
Sma3	Dihydrolipoamide acetyltransferase, long form	IPR006257	-	-
Sma3	Biotin/lipoyl attachment	IPR000089	-	-
Sma3	E3 binding	IPR004167	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain