SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene5937

Length: 1253 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene5937

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene16794	93/94
SustainPine v2.0	sp_v2.0_unigene62414	1/94

Source	Descriptions	Term	Type	Identity
AutoFact	aldo/keto reductase family protein [Arabidopsis thaliana] dbj\|BAB11492.1\| aldose reductase-like protein [Arabidopsis thaliana] gb\|AAY78879.1\| aldo/keto reductase family protein [Arabidopsis thaliana] gb\|AED97606.1\| aldo/keto reductase family protein [Arab	-	-	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	aldo keto reductase family protein	-	-	73%

Source	InterPros	Term	Type	e value	Identity
Sma3	Aldo/keto reductase	IPR001395	-	0.0	-
Sma3	Aldo/keto reductase, conserved site	IPR018170	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NPH6

Fln msg:

Fln protein: MGSVGRVLELNTGTKIPLVGLGTGAVNQNPEDIKTAVATAIEVGYRHFDTASLYRSECPLGDALKDAFLKGLVAREEVFVTTKLWCGDLDDPVSALRTSLKNLQLDYVDLYLIHWPVRLRKEASFPIPKEEDFLPLDLESVWQGMEQCVHLGLTKAIGVSNFSSKKIGDLLSHAKIPPAVNQVEMHPLWQQQKLRDYCSKVNIHVSAWSPLGGPPKAQGSNGVIDSPVIKEIAEKYGKTTAQVILRWGLEQGVSVLPKSYNKGRITQNFQVFDWSLTAEDHSKISRLEQKKANRAQEMINSTTSPYKSVEELWDGEI*

Protein Length: 319

Fln nts: ATGGGGAGAAGAATCCAAGCCATTTTGCTTGTTGGATGCTCTGATCGTCACTGGTCACTGCTTCAAAATTTTCCAAGAAAACCTTTTGCCAGAGTCTGCTAAA_-_ATGGGGAGTGTAGGCAGAGTTCTAGAGCTCAACACAGGCACCAAAATACCATTGGTCGGTCTTGGAACAGGTGCCGTGAATCAAAACCCCGAGGACATTAAGACAGCAGTGGCTACGGCAATAGAGGTGGGTTACAGGCACTTTGACACAGCTAGCCTATACAGGTCAGAATGTCCCTTGGGAGATGCTTTAAAGGATGCCTTTTTGAAGGGCTTAGTGGCACGGGAGGAGGTTTTTGTGACCACAAAACTGTGGTGTGGAGATTTAGATGATCCTGTATCTGCATTGAGGACGAGCTTAAAGAATTTGCAGCTGGATTATGTGGATTTGTACCTTATCCACTGGCCCGTAAGGTTGAGAAAGGAAGCCTCCTTTCCAATCCCCAAGGAGGAAGACTTTTTGCCCTTAGATCTTGAGTCTGTATGGCAAGGAATGGAACAATGTGTTCATCTGGGGCTCACAAAAGCCATTGGCGTGAGCAACTTCTCTTCTAAGAAGATTGGGGATCTGTTGAGCCATGCCAAGATTCCACCTGCTGTCAATCAGGTGGAGATGCATCCACTATGGCAACAACAAAAGTTGAGAGATTATTGCAGCAAGGTGAACATTCACGTGAGTGCATGGTCTCCTCTTGGAGGTCCCCCTAAAGCACAGGGTTCAAATGGTGTTATTGATAGCCCTGTTATTAAAGAGATCGCTGAAAAATATGGAAAAACTACTGCTCAGGTTATATTGAGGTGGGGTTTGGAACAGGGAGTAAGTGTGTTGCCAAAAAGCTACAACAAAGGGAGAATAACTCAGAATTTTCAGGTATTTGACTGGTCTTTAACTGCAGAAGATCATTCAAAAATCAGCAGACTGGAACAGAAGAAGGCCAATAGGGCACAGGAAATGATTAACTCTACCACCAGCCCTTACAAATCTGTTGAAGAATTGTGGGATGGAGAGATCTAA___CAAGATAATTAGTATACTGAGTGTTATTTGATTCATCTATACTATGGAGGAAGATATTTTTAACCTCAAACTAATAGATGTTAAATAAGTTAATGCGCATATAGAGGATATTATTCTGTGTGTTCCAAAACCATATGAAGGATAACTAGCATTGAAAATCTGGAGATCTCAGTGTATGCTGTTTACTTGTGTACTA

Fln Alignment:

Contig5937___MGSVGRVLELNTGTKIPLVGLGTGAVNQNPEDIKTAVATAIEVGYRHFDTASLYRSECPLGDALKDAFLKGLVAREEVFVTTKLWCGDLDDPVSALRTSLKNLQLDYVDLYLIHWPVRLRKEASFPIPKEEDFLPLDLESVWQGMEQCVHLGLTKAIGVSNFSSKKIGDLLSHAKIPPAVNQVEMHPLWQQQKLRDYCSKVNIHVSAWSPLGGPPKAQGSNGVIDSPVIKEIAEKYGKTTAQVILRWGLEQGVSVLPKSYNKGRITQNFQVFDWSLTAEDHSKISRLEQKKANRAQEMINSTTSPYKSVEELWDGEI
A9NPH6_________________MGSAGKVVELNAGTKIPLVGLGTAAINQNPEEIKTAVATALEVGYRHFDTASLYRSECALGDALKEACLKGLVAREEFFVTTKLWSEDLDDPVSALRTSLKNLKLEYVDLYLIHWPLRLRKGSSFPIPKEEDFLPLDLESAWKGMEQCVHLGLTKAIGVSNFSCKKIGDLLSHAKISPAVNQVEMHPLWQQKKLRDYCSKVNIHVSAWSPLGGAPNAQGSNGVMDNPVIKEIAEKHGKTTAQVILRWGLEQGISVLPKSYNKGRIAQNFQVFDWSLTAEDHSKISRLEQKKANRGEEVVNSTTSPYKSVEELWDGEI

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
1074		87		12	0.992554
1096	87		12		0.992554
1111	25		75		0.996473
1132	66			33	0.997452
1138		33		66	0.997452
1194			50	50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain