SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene4453

Length: 1123 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene4453

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene1958	6/6

Source	Descriptions	Term	Type	Identity
AutoFact	Serine/threonine-protein kinase bri1, putative n=1 Tax=Ricinus communis RepID=B9T4K2_RICCO	-	-	78%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	52%
Blast2go	brassinosteroid receptor	-	-	88%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phosphoprotein phosphatase.	EC:3.1.3.16	-	0.0	88%
Blast2go	Mitogen-activated protein kinase kinase kinase.	EC:2.7.11.25	-	0.0	88%

Source	GOs	Term	Type	Identity
Blast2go	pollen exine formation	GO:0010584	Biological Process	88%
Blast2go	brassinosteroid homeostasis	GO:0010268	Biological Process	88%
Blast2go	positive regulation of flower development	GO:0009911	Biological Process	88%
Blast2go	detection of brassinosteroid stimulus	GO:0009729	Biological Process	88%
Blast2go	unidimensional cell growth	GO:0009826	Biological Process	88%
Blast2go	protein phosphorylation	GO:0006468	Biological Process	88%
Blast2go	response to UV-B	GO:0010224	Biological Process	88%
Blast2go	tapetal cell differentiation	GO:0048657	Biological Process	88%
Blast2go	brassinosteroid mediated signaling pathway	GO:0009742	Biological Process	88%
Blast2go	leaf development	GO:0048366	Biological Process	88%
Blast2go	defense response	GO:0006952	Biological Process	88%
Blast2go	phosphoprotein phosphatase activity	GO:0004721	Molecular Function	88%
Blast2go	protein heterodimerization activity	GO:0046982	Molecular Function	88%
Blast2go	steroid binding	GO:0005496	Molecular Function	88%
Blast2go	MAP kinase kinase kinase activity	GO:0004709	Molecular Function	88%
Blast2go	receptor activity	GO:0004872	Molecular Function	88%
Blast2go	protein homodimerization activity	GO:0042803	Molecular Function	88%
Blast2go	ATP binding	GO:0005524	Molecular Function	88%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	88%
Blast2go	integral to membrane	GO:0016021	Cellular Component	88%
Blast2go	protein complex	GO:0043234	Cellular Component	88%
Blast2go	endosome	GO:0005768	Cellular Component	88%
Blast2go	plasma membrane	GO:0005886	Cellular Component	88%

Source	InterPros	Term	Type	Identity
Sma3	Intradiol ring-cleavage dioxygenase, C-terminal	IPR000627	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Enolpyruvate transferase domain	IPR001986	-	-
Sma3	Leucine-rich repeat, typical subtype	IPR003591	-	-
Sma3	Pistil-specific extensin-like protein	IPR003882	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Tyrosine-protein kinase, active site	IPR008266	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Leucine-rich repeat 2	IPR013101	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Homeobox, conserved site	IPR017970	-	-
Sma3	Interleukin-4/interleukin-13, conserved site	IPR018096	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LPH3

Fln msg: your sequence is shorter than subject: 189 - 360

Fln protein: LHHSCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMNAMDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLTGKQPTDSVDFGDNNLVGWVKQHAKLKISDVFDPDLMKDPSLEVDLLQHLRIACECLDDRPWRRPTMIQVLAMFRELQKDDEDTELDSFSLVDVNVEELPDQQV*

Protein Length: 190

Fln nts: CTTCACCATAGTTGCATTCCTCACATTATACACAGAGACATGAAATCAAGCAATGTCCTTCTTGACGAAAATCTTGAAGCGAGAGTTTCAGACTTTGGAATGGCAAGGCTCATGAATGCAATGGACACCCATCTGAGTGTCAGCACACTTGCAGGCACACCGGGATATGTTCCTCCAGAGTATTACCAGAGTTTTAGATGCACAACAAAGGGCGATGTTTACAGCTATGGAGTAATCTTGTTAGAGCTTCTCACAGGGAAACAGCCTACTGATTCTGTAGACTTTGGAGACAATAATCTGGTTGGATGGGTCAAACAACATGCCAAATTGAAAATCTCAGATGTTTTTGATCCAGACCTGATGAAAGATCCAAGCTTGGAAGTGGATCTACTTCAACATCTTAGAATTGCTTGTGAATGCTTGGATGATCGTCCTTGGCGTAGGCCTACTATGATTCAAGTATTGGCCATGTTTAGAGAGCTTCAAAAGGATGATGAGGACACGGAGCTTGACAGCTTCTCACTGGTAGATGTAAATGTTGAAGAACTTCCTGATCAACAAGTATGA___TCCCGTATTTTCTTCCCTATCATTGTTCACTCAATGCACAGATGTAAATGCAAAGAAAGCTCTTGAATGACACCTTTTTTTTGGCTCCTCCCTAAACTACCCCGCAGCTGTTTCTTTCTTTAGAGGATCAACAAGTATTTGCTCATCAAGCTCAAATACAATGGCACATATTTGCACCTTAGTCCTACCAAATGTAGATATTGAAGGAAGTTCCTAGGTCACTGTCAGCTGTTTAAGCTTTTTTCCTTCTCTTAATTCTTTCAATGCTGTCTTCTCTCTTTGTTCCCAGAGTGTGGACATTAGTCTGTTGCTTTTGGCACCCATAAGCACTATTAGCTTATCCGCAGCTGCATGTGCATGGTTTCAACGCTGAGATTTGCTTCTCATTGAATAGCTCTCAATCCTGCAGAGTGTTTGATAGAGGCTTTGGATTCTAATTATGGCAATGGTTTGGGATTTGTGTTACTGTTTTGTCTCTCTCAAATCAGAGAGATTGATGGGTGCTATGAATTCTACCTTGAACAGTGGAATTTATGCATTGTTCATTTTGAATGTC

Fln Alignment:

Contig4453___LHHSCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMNAMDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLTGKQPTDS--VDFGDNNLVGWVKQHAKLKISD-VFDPDLMKDPSLEVDLLQHLRIACECLDDRPWRRPTMIQVLAMFRELQKD
B8LPH3_________________LHHDCIPHIIHRDIKSSNILLDEEMEARISDFGLATLINPDQTHVS-TIVAGTFGYLAPEYVETGRATEKGDVYSYGVVLLELITGKRPTDEAFVEKG-NNIVTWIRALVEDGCEEHAFDPDLV-DVLTRREMKEAFIVAYNCLNQNPSERPTMAQVVKMLEEIKLD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain