SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene3265

Length: 1031 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene3265

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18378	21/21

Source	Descriptions	Term	Type	Identity
AutoFact	26S proteasome regulatory particle non-ATPase subunit 12 [Camellia sinensis]	-	-	76%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	96%
Blast2go	26s proteasome non-atpase regulatory subunit 8	-	-	88%

Source	GOs	Term	Type	Identity
Blast2go	proteasomal ubiquitin-dependent protein catabolic process	GO:0043161	Biological Process	88%
Blast2go	proteasome assembly	GO:0043248	Biological Process	88%
Blast2go	response to cytokinin stimulus	GO:0009735	Biological Process	88%
Blast2go	response to misfolded protein	GO:0051788	Biological Process	88%
Blast2go	flower development	GO:0009908	Biological Process	88%
Blast2go	skotomorphogenesis	GO:0009647	Biological Process	88%
Blast2go	response to heat	GO:0009408	Biological Process	88%
Blast2go	response to auxin stimulus	GO:0009733	Biological Process	88%
Blast2go	regulation of anthocyanin biosynthetic process	GO:0031540	Biological Process	88%
Blast2go	leaf development	GO:0048366	Biological Process	88%
Blast2go	cotyledon development	GO:0048825	Biological Process	88%
Blast2go	post-embryonic root development	GO:0048528	Biological Process	88%
Blast2go	proteasome complex	GO:0000502	Cellular Component	88%
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	88%

Source	InterPros	Term	Type	e value	Identity
Sma3	26S proteasome non-ATPase regulatory subunit Rpn12	IPR006746	-	0.0	-
Sma3	SAC3/GANP/Nin1/mts3/eIF-3 p25	IPR005062	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LPE5

Fln msg:

Fln protein: MEGTLSDVAQVFDRFKAAYTRNDLSTCSTLLSQLKVMLTGFPSLPPLYCESPAAIHELTLARDIFEHAVVLSVKTEDQDAFERDFLQLKPYYTDTRDLIPPSAQEYPILGLNLLRLLVQNRIAEFHTELELLSPEALENPCIKHAVELEQSFMEGAYNRVLSARQAVPHETYVYFMDLLAKTVRDEIAGCSEKAYDYLSLQDAKQILMFTSNLELEEYVSEEHPEWEIRNGSVYFQKAKESAPSKEIPSLQLINQTLGYARELERIV*

Protein Length: 269

Fln nts: CAGCGAAAGTCTTCTTCGTGACTAGTTGCAGGGTTTGAAGGTGTCGAAATAGCGGATTATCGTCGTTTCAAAGAAAGGAAAGCC_-_ATGGAAGGCACGCTCTCGGATGTAGCTCAAGTATTCGATCGCTTCAAAGCCGCTTATACCAGAAATGATCTGTCAACATGTTCAACTTTACTGTCTCAACTGAAGGTTATGTTGACAGGATTTCCAAGCCTCCCTCCCTTGTACTGTGAATCACCTGCAGCGATTCATGAACTGACGCTAGCAAGGGATATTTTTGAGCATGCTGTTGTTCTCAGTGTCAAAACTGAAGATCAAGATGCCTTTGAGAGGGACTTCTTGCAGCTGAAGCCATATTACACGGATACAAGAGATCTTATTCCACCATCTGCTCAGGAATATCCGATCCTGGGGCTTAATTTACTGCGTCTTCTGGTGCAAAATAGAATTGCAGAATTTCACACAGAGCTGGAGCTCCTTTCACCTGAGGCACTTGAGAATCCATGCATTAAGCATGCTGTCGAATTAGAGCAATCATTCATGGAAGGTGCCTATAATCGTGTTCTCAGTGCTCGGCAGGCAGTCCCGCATGAAACTTATGTTTATTTCATGGACCTTCTTGCAAAAACTGTCAGAGATGAAATCGCAGGCTGCAGTGAGAAGGCATATGATTATTTATCACTACAGGATGCTAAGCAAATCTTGATGTTCACCTCTAATTTGGAATTAGAGGAATACGTCTCTGAGGAGCATCCGGAGTGGGAGATAAGGAATGGCTCTGTGTATTTCCAAAAAGCGAAAGAGTCTGCTCCAAGTAAAGAGATTCCTTCATTGCAACTCATTAATCAAACACTGGGGTATGCAAGGGAATTGGAACGCATTGTGTAG___AGAGACAGGAATGGTTCTTAGCTTGGGTTTTATCTTTCTCCCTGAGAAATTTTTACCTGAACTTGTGGTTGGGGTCAAAATGAAGTTCTCATTTTGATTCTAAAATATTTTTAATTTCCAATGCCAGCATCATGTAACCATTT

Fln Alignment:

Contig3265___MEGTLSDVAQVFDRFKAAYTRNDLSTCSTLLSQLKVMLTGFPSLPPLYCESPAAIHELTLARDIFEHAVVLSVKTEDQDAFERDFLQLKPYYTDTRDLIPPSAQEYPIXXXXXXXXXVQNRIAEFHTELELLSPEALENPCIKHAVELEQSFMEGAYNRVLSARQAVPHETYVYFMDLLAKTVRDEIAGCSEKAYDYLSLQDAKQILMFTSNLELEEYVSEEHPEWEIRNGSVYFQKAKESAPSKEIPSLQLINQTLGYARELERIV
B8LPE5_________________MEGTLSDVSQVFDRFKAAFTRNDLSTCTTLLSQLKVMLTGFPSLPPLYCESPTAIHELTLARDIFEHAVVLSVKTEDQDAFERDFLQLKPYYTDTRDLIPPSAQEYPILGLNLLRLLVQNRIAEFHTELELLSPEALENPCIKHAVELEQSFMEGAYNRVLSARQAVPHETYVYFMDLLAKTVRDEIAGCSEKAYDYLSLQDAKQILMFSSNQDLEEYVTEEHPEWEIRNGCVYFQKAKESAPSKEIPSLQLINQTLGYARELERIV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain