SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene3164

Length: 750 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene3164 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene1396	6/6

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Polcalcin Jun o, putative n=1 Tax=Ricinus communis RepID=B9SJ25_RICCO	-	-	2.0e-35	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	54%
Blast2go	calcium-binding pollen allergen	-	-	2.10195e-44	70%

Source	GOs	Term	Type	e value	Identity
Blast2go	root hair elongation	GO:0048767	Biological Process	2.10195e-44	70%
Blast2go	response to cold	GO:0009409	Biological Process	2.10195e-44	70%
Blast2go	cytoplasm	GO:0005737	Cellular Component	2.10195e-44	70%
Blast2go	nucleus	GO:0005634	Cellular Component	2.10195e-44	70%

Source	InterPros	Term	Type	Identity
Sma3	Recoverin	IPR001125	-	-
Sma3	Calcium-binding EF-hand	IPR002048	-	-
Sma3	Parvalbumin	IPR008080	-	-
Sma3	EF-hand-like domain	IPR011992	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	EF-hand	IPR018248	-	-
Sma3	EF-HAND 2	IPR018249	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain