SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene2501

Length: 1014 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene2501

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene6909	24/25

Source	Descriptions	Term	Type	Identity
AutoFact	Inorganic pyrophosphatase n=1 Tax=Cucumis melo subsp. melo RepID=E5GCQ8_CUCME	-	-	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	76%
Blast2go	inorganic pyrophosphatase	-	-	89%

Source	ECs	Term	Type	e value	Identity
Blast2go	Inorganic diphosphatase.	EC:3.6.1.1	-	0.0	89%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Oxidative phosphorylation	00190		0.0	89%

Source	GOs	Term	Type	Identity
Blast2go	defense response to bacterium	GO:0042742	Biological Process	89%
Blast2go	response to cadmium ion	GO:0046686	Biological Process	89%
Blast2go	phosphate-containing compound metabolic process	GO:0006796	Biological Process	89%
Blast2go	response to salt stress	GO:0009651	Biological Process	89%
Blast2go	magnesium ion binding	GO:0000287	Molecular Function	89%
Blast2go	inorganic diphosphatase activity	GO:0004427	Molecular Function	89%
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	89%
Blast2go	chloroplast stroma	GO:0009570	Cellular Component	89%
Blast2go	thylakoid	GO:0009579	Cellular Component	89%
Blast2go	membrane	GO:0016020	Cellular Component	89%

Source	InterPros	Term	Type	e value	Identity
Sma3	Inorganic pyrophosphatase	IPR008162	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NLE1

Fln msg: Overlapping hits, possible frame ERROR between 422 and 371,

Fln protein: MAALRTVAAANVIQCRLGSNSGNSIVISRPAVLSLQCIFPSVKALKQQRWLHAKPRGFTCRALYRPEIETKEDGNPQTLDYRVFFFDKSGKKISPWHDIPLQLGDGxxxxxxxxxxxxxxxxxxxTEEPYTPIKQDTKKGKLRYYPYNINWNYGLLPQTWEDPSLANAEVEGAFGDNDPVDVVEIGERQAKIGEVLKVKPLAALAMIDEGELDWKIVAISVDDPRAPLVNDVNDVEKHFPGTLTAIRNWFRDYKIPDGKPANKFGLGDKPANKEYALKVIAETNESWAKLVKRSIPAGELSLA*

Protein Length: 305

Fln nts: ATGGGGGATCCTCCAGAGAAGTGGGTTAGGCGATTGAGTTATTCCTTCCA_-_ATGGCGGCCCTCAGAACTGTCGCTGCTGCTAATGTTATTCAGTGTCGATTGGGCTCCAACAGTGGAAATTCGATTGTGATAAGCAGGCCTGCTGTCCTTTCTCTGCAATGCATTTTTCCTTCTGTGAAAGCACTGAAGCAACAGAGATGGCTGCATGCGAAGCCAAGAGGTTTCACCTGCAGGGCTCTCTACAGGCCAGAGATCGAGACTAAAGAGGATGGCAACCCACAAACACTAGATTACAGAGTTTTCTTCTTTGACAAATCTGGGAAGAAGATATCACCTTGGCATGATATTCCATTGCAATTAGGAGATGGAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxACTGAAGAGCCATACACTCCAATCAAGCAGGACACTAAGAAGGGCAAGCTTCGATATTACCCATATAACATAAATTGGAACTATGGATTGCTTCCACAAACATGGGAAGACCCATCTCTTGCAAATGCAGAAGTTGAAGGAGCATTTGGTGACAATGATCCAGTTGATGTGGTTGAGATTGGGGAAAGGCAGGCTAAAATTGGAGAAGTACTTAAAGTGAAGCCATTAGCTGCTTTAGCAATGATTGATGAAGGTGAATTGGATTGGAAAATTGTTGCTATTTCTGTTGATGATCCAAGAGCACCACTTGTCAATGATGTCAACGATGTTGAGAAGCACTTTCCGGGCACATTAACTGCCATTCGGAACTGGTTTAGGGATTACAAGATTCCAGATGGAAAACCTGCTAATAAGTTTGGGCTTGGTGATAAGCCAGCAAATAAGGAGTATGCACTCAAAGTAATTGCGGAGACAAATGAATCTTGGGCAAAATTAGTGAAACGTTCTATTCCTGCAGGGGAGTTATCTCTAGCGTAA___TCAGGAAATCATTTCAAGGTTAACAGTATCTTACACCAATCAAGCTGATCAAA

Fln Alignment:

Contig2501___MAALRTVAAANVIQCRLGSNSGNSIVISRPAVLSLQCIFPSVKALKQQRWLHAKPRGFTCRALYRPEIETKEDGNPQTLDYRVFFFDKSGKKISPWHDIPLQLGDGVxxxxxxxxxxxxxxxxxATEEPYTPIKQDTKKGKLRYYPYNINWNYGLLPQTWEDPSLANAEVEGAFGDNDPVDVVEIGERQAKIGEVLKVKPLAALAMIDEGELDWKIVAISVDDPRAPLVNDVNDVEKHFPGTLTAIRNWFRDYKIPDGKPANKFGLGDKPANKEYALKVIAETNESWAKLVKRSIPAGELSLA
A9NLE1_________________MAALRTVAAVNVVQSRLASNNVNSIVISRPAVLYLQCGFPSVKALKQQRWLRAKPRGFTCRALYRPDIETKEEGTPQTLDYRIFFFEKSGKKISPWHDIPLQLGDGVxxxxxxxxxxxxxxxxxATEEPYTPIKQDTKKGKLRYYPYNINWNYGLLPQTWEDPSLANAEVEGAFGDNDPVDVVEIGERQAKMGEVLKVKPLAALAMIDEGELDWKIVAISVDDPRAPLVNDVNDVEKHFPGTLTAIRNWFRDYKIPDGKPANKFGLGDKPANKEYALKVIAETNESWAKLVKRSIPAGELSLA

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
212	16		83		0.994512
273	50	16			1.0
274	50	50			1.0
625	16			16	0.988813
763		85		14	0.993533
766	14			85	0.993533
768			14	85	0.993533
769		85	14		0.993533
770		85	14		0.993533
987		66	33		0.997452
988	66	33			0.997452
990	33			66	0.997452
994	33			66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain