SustainPineDB

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene2368

Length: 1423 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene2368

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene15586	112/112

Source	Descriptions	Term	Type	Identity
AutoFact	14-3-3 domain containing protein	-	-	79%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	99%
Blast2go	14-3-3 protein	-	-	94%

Source	InterPros	Term	Type	e value	Identity
Sma3	14-3-3 protein	IPR000308	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NKY2

Fln msg:

Fln protein: MSPAESSREESVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVTMIREYRGKVESELSNICDGILRLLDTHLIPSSTSGESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKAAQDIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEETGGDEIKEAPKKEEGDGH*

Protein Length: 264

Fln nts: ATGGGGAGCCTCCCTCGTTCTTTAGCCCTTTTGTTGATTGTATGTGTTCCACAGCCTTTCAGGAGGAGGAGAAGCTAGCGGGAAAAGGCACGCCGTTGCTGCCGAGGTTTGGCCTTTTGGAAACACGGATCTCTGCGTCCCTTGACGCCATTGAGGATTTTGATCTTTCGGTTTAGGTTTTCTTTTCAGGGAAA_-_ATGTCGCCTGCGGAGTCTTCTCGTGAAGAAAGTGTGTATATGGCCAAGCTCGCTGAACAGGCAGAGCGCTATGAGGAAATGGTAGAGTACATGGAGAAAGTTGCCAAGACAGTAGATGTGGAGGAACTTACTGTCGAGGAAAGGAATCTGCTGTCAGTGGCTTATAAGAATGTAATTGGAGCTCGCAGGGCTTCATGGAGGATAATTTCCTCCATTGAACAAAAGGAAGAGAGCAGGGGAAATGAAGAACACGTTACTATGATAAGAGAATACAGAGGCAAGGTTGAGTCTGAGCTCAGTAATATTTGTGATGGCATTCTACGTCTTCTGGATACACATCTTATCCCTTCATCCACATCTGGTGAGTCCAAGGTATTTTATCTTAAGATGAAGGGTGATTACCATCGATATCTTGCAGAATTTAAAACCGGTGCTGAGAGGAAGGAAGCTGCTGAAAGTACATTGCTTGCATACAAGGCAGCCCAGGACATTGCGACTGCAGAGTTGGCTCCAACTCACCCTATCAGACTGGGATTGGCCCTTAACTTTTCTGTTTTCTATTATGAGATTTTGAATTCACCAGATCGTGCCTGTACACTTGCCAAGCAGGCCTTTGACGAGGCAATTGCAGAGCTTGACACGTTAGGTGAAGAATCTTACAAGGATAGCACTTTGATCATGCAGCTCCTTCGTGATAACCTCACGTTATGGACTTCAGACATGCAGGAGGAGACTGGAGGAGATGAAATCAAAGAAGCGCCGAAGAAAGAAGAAGGTGATGGACACTGA___CATCTTTTTTCTGAATGAAATCGATTAGGATGGTGAAGGGGATGAACGTCAATGTTTATCCGTAAATGACTGTCAAGTAGGTTAGATTCATGAGATATGGTCAAATATGTTGTATTAGAGGTTTTAGAGTGTTTTTGTGGTTTTCTGCACGATTGTGTGCTAATGGGGATCTTTCAGCAAGTTCTCCTATAAAATCTGCTGCCCTGCAAGATTTTATTGTTGCAGGGTACTGCTTTGTACTCCAATCATACCATGGAGGGCACACTTAAAGTTGTTATTTAAGTGTTATTGATGTCATTTGGAAGGATCCCTGCTTGTCAGTGGATGGATATGGTAGCCTGCAGACCTGGGATTGTAATAACATAGTGGATAAATTACTGCAAGGTCTAATATTATACTGTGATGTACGCCATTTTTTCTGCTCACCATTATCGTCTTTT

Fln Alignment:

Contig2368___MSPAESSREESVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVTMIREYRGKVESELSNICDGILRLLDTHLIPSSTSGESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKAAQDIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEETGGDEIKEAPKKEEGDGH
A9NKY2_________________MSPAESSREESVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVTMIREYRGKVESELSNICDGILRLLDTHLIPSSTSGESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKAAQDIAIAELAPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEETGGDEIKEAPKKEEGDGH

SNPs (tot: 5)

Position	A %	G %	T %	Probability
945	66	33		0.997452
946	66	33		0.997452
947	66	33		0.997452
968	75		25	0.996473
971		11	88	0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain