SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene1761

Length: 620 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene1761 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene9905	1/3
SustainPine v2.0	sp_v2.0_unigene28323	2/3

Source	Descriptions	Term	Type	Identity
AutoFact	cell division protease ftsH-11 [Arabidopsis thaliana] sp\|Q9FGM0.1\|FTSHB_ARATH RecName: Full=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial; Short=AtFTSH11; Flags: Precursor dbj\|BAB08420.1\| cell division protein FtsH protease-like	-	-	79%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	56%
Blast2go	atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like	-	-	92%

Source	ECs	Term	Type	e value	Identity
Blast2go	Adenosinetriphosphatase.	EC:3.6.1.3	-	0.0	92%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Purine metabolism	00230		0.0	92%

Source	GOs	Term	Type	Identity
Blast2go	catabolic process	GO:0009056	Biological Process	92%
Blast2go	response to heat	GO:0009408	Biological Process	92%
Blast2go	protein metabolic process	GO:0019538	Biological Process	92%
Blast2go	response to high light intensity	GO:0009644	Biological Process	92%
Blast2go	peptidase activity, acting on L-amino acid peptides	GO:0070011	Molecular Function	92%
Blast2go	ATPase activity	GO:0016887	Molecular Function	92%
Blast2go	mitochondrion	GO:0005739	Cellular Component	92%
Blast2go	chloroplast	GO:0009507	Cellular Component	92%

Source	InterPros	Term	Type	Identity
Sma3	Ribosomal protein S7	IPR000235	-	-
Sma3	RNA recognition motif domain	IPR000504	-	-
Sma3	Peptidase M41	IPR000642	-	-
Sma3	Caspase Recruitment	IPR001315	-	-
Sma3		IPR001984	-	-
Sma3	Pentatricopeptide repeat	IPR002885	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	ATPase, AAA-type, core	IPR003959	-	-
Sma3	ATPase, AAA-type, conserved site	IPR003960	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3	Peptidase, FtsH	IPR005936	-	-
Sma3	Twin-arginine translocation pathway, signal sequence	IPR006311	-	-
Sma3	Peptidase M41, FtsH extracellular	IPR011546	-	-
Sma3	Nucleotide-binding, alpha-beta plait	IPR012677	-	-
Sma3		IPR017909	-	-
Sma3	Peptidase S26A, signal peptidase I, serine active site	IPR019756	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain