SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene402

Length: 592 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene402 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene14492	6/10
SustainPine v2.0	sp_v2.0_unigene21112	4/10

Source	Descriptions	Term	Type	e value	Identity
AutoFact	heterogeneous nuclear ribonucleoprotein R [Gallus gallus] ref\|XP_003212536.1\| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Meleagris gallopavo]	-	-	4.0e-19	33%
FL-Next	tr=Os12g0577100 protein; Oryza sativa subsp. japonica (Rice).	-	-	0.0	47%
Blast2go	heterogeneous nuclear ribonucleoprotein r	-	-	0.0	56%

Source	GOs	Term	Type	Identity
Blast2go	RNA processing	GO:0006396	Biological Process	56%
Blast2go	nucleic acid binding	GO:0003676	Molecular Function	56%
Blast2go	nucleotide binding	GO:0000166	Molecular Function	56%
Blast2go	nuclear part	GO:0044428	Cellular Component	56%
Blast2go	ribonucleoprotein complex	GO:0030529	Cellular Component	56%

Source	InterPros	Term	Type	Identity
Sma3	RNA recognition motif domain	IPR000504	-	-
Sma3	Nucleotide-binding, alpha-beta plait	IPR012677	-	-
Sma3		IPR015706	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain