SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene236

Length: 667 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene236 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene4475	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	putative 3-isopropylmalate dehydrogenase [Oryza sativa Japonica Group] gb\|ABF97968.1\| 3-isopropylmalate dehydrogenase 2, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group]	-	-	76%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	37%
Blast2go	3-isopropylmalate dehydrogenase	-	-	85%

Source	ECs	Term	Type	e value	Identity
Blast2go	3-isopropylmalate dehydrogenase.	EC:1.1.1.85	-	0.0	85%

Source	KEGGs	Term	Identity
Blast2go	Valine, leucine and isoleucine biosynthesis	00290	85%
Blast2go	Biosynthesis of alkaloids derived from histidine and purine	01065	85%
Blast2go	Metabolic pathways	01100	85%
Blast2go	Biosynthesis of secondary metabolites	01110	85%

Source	GOs	Term	Type	Identity
Blast2go	leucine biosynthetic process	GO:0009098	Biological Process	85%
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	85%
Blast2go	NAD binding	GO:0051287	Molecular Function	85%
Blast2go	magnesium ion binding	GO:0000287	Molecular Function	85%
Blast2go	3-isopropylmalate dehydrogenase activity	GO:0003862	Molecular Function	85%
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	85%
Blast2go	chloroplast stroma	GO:0009570	Cellular Component	85%

Source	InterPros	Term	Type	e value	Identity
Sma3	Isopropylmalate dehydrogenase	IPR004429	-	0.0	-
Sma3	Isocitrate/isopropylmalate dehydrogenase	IPR001804	-	0.0	-

Full-Lengther Next Prediction

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain