SustainPineDB

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Assembly info
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene13862

Length: 413 nt

UniGene Fasta

>biog3_v1.0_unigene13862
AATGTGTAAAGATGCAACCGATGACTTTGAAGATGTTGGACATAGTGACAGTGCTAGAGCTATGATGGATGAATATTACGTGGGAGTCATAGATCCCTCATCAGTTCCCTCGAAGCCAAAATACACTCCGGCTAAGCAGGCACCATACAATCCTGACAAGTCATCTGAATTTATCATAAAATTTTACAGTTTCTTGTTCCATTGCTCATTTTGGGCTTGGCTGTTGCTGTCCGCTACTATACCAAATCAAGCTAAAATTCAGGAATTTCTATAGGATTCCACCATTGTTTAAGATATATATATCTATGTATTTGTTTGAGTTATGTCGTTAGTCTGGCTTCTATTGTTGTAATTATTTGGAACCATAGTAACAAGATCAGGTTGGCTAGAACTGTTTCAATGCAAATTGTCGC

Ace file of the UniGene biog3_v1.0_unigene13862

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18380	4/4

Source	Descriptions	Term	Type	Identity
AutoFact	Cytochrome B5 isoform 1, putative n=2 Tax=Euphorbiaceae RepID=B9S527_RICCO	-	-	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	cytochrome b5	-	-	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	0.0	87%
Blast2go	cell part	GO:0044464	Cellular Component	0.0	87%

Source	InterPros	Term	Type	e value	Identity
Sma3	Cytochrome b5	IPR001199	-	0.0	-
Sma3	Cytochrome b5, heme-binding site	IPR018506	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NST8

Fln msg: Overlapping hits, possible frame ERROR between 196 and 178, your sequence is shorter than subject: 85 - 134

Fln protein: MCKDATDDFEDVGHSDSARAMMDEYYVGVIDPSSVPSKPKYTPAKQAPYNPDKSSEFIxxxxxxxxPLLILGLAVAVRYYTKSS*

Protein Length: 86

Fln nts: AATGTGTAAAGATGCAACCGATGACTTTGAAGATGTTGGACATAGTGACAGTGCTAGAGCTATGATGGATGAATATTACGTGGGAGTCATAGATCCCTCATCAGTTCCCTCGAAGCCAAAATACACTCCGGCTAAGCAGGCACCATACAATCCTGACAAGTCATCTGAATTTATCxxxxxxxxxxxxxxxxxxxxxxxxCCATTGCTCATTTTGGGCTTGGCTGTTGCTGTCCGCTACTATACCAAATCAAGCTAAAATTCAGGAATTTCTATAGGATTCCACCATTGTTTAAGATATATATATCTATGTATTTGTTTGAGTTATGTCGTTAGTCTGGCTTCTATTGTTGTAATTATTTGGAACCATAGTAACAAGATCAGGTTGGCTAGAACTGTTTCAATGCAAATTGTCGC

Fln Alignment:

biogeco3_mira_c5379___KDATDDFEDVGHSDSARAMMDEYYVGVIDPSSVPSKPKYTPAKQAPYNPDKSSEFIIxxxxxxVPLLILGLAVAVRYYTKSS
A9NST8__________________KDATDDFEDVGHSSSARAMMDEYYVGDIDPSTIPSKPKYTPAKQAPYNPDKSSEFIIxxxxxxVPLLILGMAVAVRYYTKSS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain