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UniGene Name: biog3_v1.0_unigene8629
Length: 212 nt
 UniGene Fasta
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| >biog3_v1.0_unigene8629
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Ace file of the UniGene biog3_v1.0_unigene8629
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If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
| Annotations |
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| Parent Assembly | Parent UniGene | Reads (related/total) |
|---|---|---|
| SustainPine v2.0 | sp_v2.0_unigene12170 | 3/3 |
| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | lectin protein kinase-like protein [Arabidopsis thaliana] sp|Q9XID3.1|Y1343_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; Flags: Precursor gb|AAD39605.1|AC007454_4 Contains similarity to gi|479356 protein kin | - | - | 0.0 | 58% |
| Blast2go | protein | - | - | 0.0 | 80% |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases. | EC:2.7.11.- | - | 0.0 | 80% |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | recognition of pollen | GO:0048544 | Biological Process | 0.0 | 80% |
| Blast2go | protein phosphorylation | GO:0006468 | Biological Process | 0.0 | 80% |
| Blast2go | sugar binding | GO:0005529 | Molecular Function | 0.0 | 80% |
| Blast2go | protein binding | GO:0005515 | Molecular Function | 0.0 | 80% |
| Blast2go | ATP binding | GO:0005524 | Molecular Function | 0.0 | 80% |
| Blast2go | protein serine/threonine kinase activity | GO:0004674 | Molecular Function | 0.0 | 80% |
| Blast2go | plasma membrane | GO:0005886 | Cellular Component | 0.0 | 80% |
| Full-Lengther Next Prediction |
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Fln status: Coding
Fln database: testcode
Fln msg:
Test code: 1
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
| SNPs (tot: 2) |
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| Position | A % | C % | G % | T % | Probability |
|---|---|---|---|---|---|
| 32 | 33 | 66 | 0.997452 | ||
| 154 | 75 | 25 | 0.996473 |
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
