SustainPineDB

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene5814

Length: 1556 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene5814

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene16721	30/31

Source	Descriptions	Term	Type	Identity
AutoFact	Apyrase-like protein n=1 Tax=Nicotiana tabacum RepID=A0MWC2_TOBAC	-	-	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	47%
Blast2go	apyrase-like protein	-	-	76%

Source	ECs	Term	Type	e value	Identity
Blast2go	Nucleoside-diphosphatase.	EC:3.6.1.6	-	0.0	76%

Source	KEGGs	Term	Type	Identity
Blast2go	Purine metabolism	00230		76%
Blast2go	Pyrimidine metabolism	00240		76%
Blast2go	Adenosinetriphosphatase.	EC:3.6.1.3	-	76%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Purine metabolism	00230		0.0	76%

Source	GOs	Term	Type	Identity
Blast2go	pollen germination	GO:0009846	Biological Process	76%
Blast2go	nucleoside-diphosphatase activity	GO:0017110	Molecular Function	76%
Blast2go	ATPase activity	GO:0016887	Molecular Function	76%
Blast2go	Golgi apparatus	GO:0005794	Cellular Component	76%

Source	InterPros	Term	Type	e value	Identity
Sma3	Nucleoside phosphatase GDA1/CD39	IPR000407	-	0.0	-
Sma3	Armadillo-like helical	IPR011989	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9P214

Fln msg: your sequence is longer than subject: 345 - 171

Fln protein: MSLLDAAEEVVPKALHKKTPVRVGATAGLRQLPGDSSERILQSVKEFLAGKSSLKFKSKWVTVLDGAQEGSFQWVTLNYLLGNLGHDHSNTVGIVDLGGGSVQMAYAISDDDAKNAPKPIKGEDSYVKELTLKGKNYHLYVHSYLRYGLLAARAEILKATMDSDSACILKGFHDSYKYGGSKYKASSTATGADFDQCKKLAYDSLKIKEQVCKHMKCTFGGVWNGGGGLGQKKLFVASFFFDRAAEAGFINPSVAVAKVKPSDFEEAAKKACAASYEDAGKIFPSVEKDNLPYLCMDLTYQYTLLVDGFALSPTQEITLVKKVKYKNSYVEAAWPLGSAIELVS*

Protein Length: 346

Fln nts: AATGTCTCTTTTGGATGCTGCCGAGGAAGTTGTGCCTAAAGCATTGCATAAAAAGACACCAGTTAGAGTTGGGGCAACTGCGGGACTGAGGCAATTGCCGGGGGACTCCTCAGAAAGAATATTACAATCGGTGAAGGAATTTCTGGCTGGCAAAAGTTCTTTGAAGTTTAAATCAAAATGGGTTACTGTCTTGGATGGAGCTCAAGAAGGTTCATTTCAGTGGGTTACCTTAAACTACTTGCTAGGAAACTTGGGTCACGACCACTCAAATACTGTTGGAATTGTTGATCTTGGAGGAGGATCTGTTCAAATGGCATATGCGATCTCAGATGATGATGCCAAAAATGCACCAAAACCTATCAAAGGCGAAGATTCATATGTAAAGGAATTAACCCTCAAGGGTAAAAATTATCATCTCTACGTTCACAGCTATTTGCGTTATGGCTTGTTGGCAGCCCGTGCAGAGATTCTAAAAGCTACGATGGATAGCGATTCTGCTTGCATTTTGAAGGGCTTTCATGATTCTTATAAATATGGTGGATCTAAATACAAGGCATCGTCAACAGCTACTGGAGCTGATTTTGACCAGTGCAAAAAGCTTGCTTATGATTCACTGAAAATTAAGGAACAGGTTTGCAAACACATGAAATGTACTTTTGGAGGTGTCTGGAATGGTGGAGGTGGGCTTGGGCAGAAGAAGTTGTTTGTAGCATCTTTTTTCTTTGACAGAGCTGCAGAGGCTGGTTTTATAAATCCAAGTGTGGCAGTGGCAAAGGTAAAGCCTTCAGATTTTGAGGAAGCAGCCAAAAAGGCTTGTGCAGCTAGTTACGAGGATGCGGGCAAGATTTTTCCTAGCGTTGAAAAAGATAATTTGCCCTATCTTTGTATGGACCTTACGTATCAGTATACTCTACTGGTTGATGGATTTGCTCTAAGTCCGACACAAGAAATTACCTTGGTGAAAAAGGTGAAGTACAAGAATTCTTACGTTGAAGCTGCATGGCCACTTGGTAGCGCTATTGAACTTGTATCTTGA___TCTGTAAGACACCTACTTTGTAATCTGAGAGAAGTTGCTGGCAGAGCAGCTCTCACTCAAATTTTGGGCACACTTGCGCCTTTTGAGGGCGATTGTACTTCTATGCCAGTTTCCAAATAAAAGTCATTCGATTGAGCACAGCCTGAGATGGCTTTAGCACCTTGATTCATCTCAACGTGGAGAGGTATTCTTTTTCAAAACTTGTATTCACTGGTTAGTGAAAGGAAGATCGATTTATATCTTCACGTCAGTTTCCAATTAGAATTCATTCAAACCAGGGAGATTCATTTCAATAGGGAGATGTATTCTTTCTCAAAGCTTGGCAAGCAAAGAATGTTGTACTATTTAAGATATTTGATTCACAATCGTAAGATGTTGCATTTGTACTAGCTGTTAAAAATTTAAATCCTCAGAAAATTTTAGTATACATTGGTTGAACTATGTCATTCTAAGCTGGCCAAGCAAATAACGTTGTAGGATTTAAGATATTTGATTCACAATCGTAAGATATTGTAACATT

Fln Alignment:

Contig5814___LLDAAEEVVPKALHKKTPVRVGATAGLRQLPGDSSERILQSVKEFLAGKSSLKFKSKWVTVLDGAQEGSFQWV
A9P214_________________LLQSAVEVVPEAARPVTPVRLGATAGLRQISEVKADKILAAVRKLFSHNTTFKFEEGWVSLLEGNQEGAFMWV

SNPs (tot: 26)

Position	A %	C %	G %	T %	Probability
461	33	66			1.0
462	33		66		1.0
518		83		16	0.994512
544		16	83		0.994512
593			80	20	0.995493
659	20			80	0.995493
833	20	80			0.995493
834		20	80		0.995493
836			80	20	0.995493
837			80	20	0.995493
842	50		50		1.0
850		25		75	0.996473
851	25			75	0.996473
882	16			83	0.994512
885		83		16	0.994512
901	12	87			0.992554
902	12		87		0.992554
904	87		12		0.992554
969	83	16			0.994512
972			83	16	0.994512
1035		20		80	0.995493
1036	20	80			0.995493
1118			66	33	0.997452
1165	25	75			0.996473
1323		33	66		0.997452
1406	66		33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain