SustainPineDB

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene5031

Length: 840 nt

UniGene Fasta

Ace file of the UniGene biog3_v1.0_unigene5031

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene4908	5/5

Source	Descriptions	Term	Type	Identity
AutoFact	Sugar transporter protein n=1 Tax=Ananas comosus RepID=A4GXC8_ANACO	-	-	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	54%
Blast2go	integral membrane protein	-	-	79%

Source	ECs	Term	Type	e value	Identity
Blast2go	2-alkenal reductase.	EC:1.3.1.74	-	0.0	79%

Source	GOs	Term	Type	Identity
Blast2go	transmembrane transport	GO:0055085	Biological Process	79%
Blast2go	carbohydrate transport	GO:0008643	Biological Process	79%
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	79%
Blast2go	sugar:hydrogen symporter activity	GO:0005351	Molecular Function	79%
Blast2go	2-alkenal reductase [NAD(P)] activity	GO:0032440	Molecular Function	79%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	79%
Blast2go	integral to membrane	GO:0016021	Cellular Component	79%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase M14, carboxypeptidase A	IPR000834	-	-
Sma3	Sugar/inositol transporter	IPR003663	-	-
Sma3	General substrate transporter	IPR005828	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Twin-arginine translocation pathway, signal sequence	IPR006311	-	-
Sma3	Major facilitator superfamily	IPR011701	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLK8

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 17 aas, your sequence is shorter than subject: 279 - 502

Fln protein: LGCLFHGGFLQL*H*FPVFYLLIGLSIIPESPRWLAKIGRESDFEASLRALRGPDVDISVEEDEIRTAVEANQQQNRFRISDLIERRYALPLTIDIGLLLLQQLSGINAIMFYGTYIFKSAGVFIKQSR*SWTWCYSGCHDCFHCMVDG*SWKTAPPHDLSWGNEYLPFSCWSCILLGDRCYRRF*RNSLQYFGLNWCIGLHSSFSLGIGAIPWIIMSEILPVNVKDVGGSIATLINWLSSFAVTMTVNLLLEWSTSGTFWMYALVAAFTVLFVALWVH

Protein Length: 280

Fln nts: ATTTGGGTTGTTTGTTTCATGGAGGCTTCTTGCAGTTATAGCACTAGTTCCCAGTGTTCTATTTGCTTATTGGTCTCTCCATTATCCCAGAATCTCCAAGATGGCTGGCTAAAATAGGCAGGGAGTCAGATTTTGAAGCTTCACTGCGGGCTCTTCGTGGCCCTGATGTTGATATTTCAGTTGAAGAAGATGAAATTAGGACTGCAGTGGAGGCAAATCAGCAGCAAAACAGATTCAGAATATCTGACCTTATTGAGAGAAGATATGCACTCCCTCTGACTATTGACATTGGTTTGCTTCTACTGCAGCAGTTGAGTGGAATTAATGCTATTATGTTCTATGGAACCTACATTTTCAAATCTGCTGGAGTTTTCATCAAGCAAAGTCGCTAATCTTGGACTTGGTGCTATTCAGGTTGTCATGACTGCTTTCACTGCATGGTTGATGGATAAAGCTGGAAGACGGCTCCTCCTCATGATCTCAGCTGGGGGAATGAGTATCTGCCTTTTTCTTGTTGGTCTTGCATTCTTCTTGGAGACCGATGTTACAGGAGATTCTGACGAAACAGCTTACAGTATTTTGGCCTTAACTGGTGTATTGGTTTACATAGTTCCTTTTCTCTTGGTATAGGAGCCATTCCGTGGATTATTATGTCAGAGATCCTTCCTGTTAATGTAAAGGATGTTGGCGGTAGTATTGCAACTCTGATAAACTGGTTATCATCTTTTGCGGTGACCATGACAGTCAATTTACTGTTAGAGTGGAGCACTTCAGGGACCTTTTGGATGTATGCACTTGTTGCTGCTTTTACAGTTTTATTTGTTGCACTATGGGTACATT

Fln Alignment:

Contig5031___PVFYLLIGLSIIPESPRWLAKIGRESDFEASLRALRGPDVDISVEEDEIRTAVEANQQQNRFRISDLIERRYALPLTIDIGXXXXXXXSGINAIMFYGTYIFKSAGVFIKQSR*SWTWCYSGCHDCFHCMVDG*SWKTAPPHDLSWGNEYLPFSCWSCILLGDRCYRRF*RNSLQYFGLNWCIGLHSSFSLGIGAIPWIIMSEILPVNVKDVGGSIATLINWLSSFAVTMTVNLLLEWSTSGTFWMY
B8LLK8_________________PCALLIIGLFVIPESPRWLAKIGKETDFESSLRALRGPDADVSVEESEIKIAVETNYRQRGVKASDLLQQRYALPLTIGIGLLLLQQLSGINGIMFYSTYIFKSAGVSSSKVATLGLGAIQVVMTAFAAWLMDKAGRRLLLLISSGGTAICLFLVGLAFFLKNHVSGGSHETGYSVLALTGVLVYIIAFSLGMGAVPWIIMSEILPVNVKGVGGSIATLTNWLTSFVVTMTINLLLEWSSSGTFWIY

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
249	25	75			0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain