SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene4876

Length: 768 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene4876 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene1378	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	beta-galactosidase [Arabidopsis thaliana] gb\|AAM10327.1\| At3g54435 [Arabidopsis thaliana] gb\|AEE79230.1\| beta-galactosidase [Arabidopsis thaliana]	-	-	60%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	59%
Blast2go	beta-galactosidase	-	-	74%

Source	ECs	Term	Type	e value	Identity
Blast2go	Beta-galactosidase.	EC:3.2.1.23	-	0.0	74%

Source	KEGGs	Term	Identity
Blast2go	Galactose metabolism	00052	74%
Blast2go	Other glycan degradation	00511	74%
Blast2go	Glycosaminoglycan degradation	00531	74%
Blast2go	Sphingolipid metabolism	00600	74%
Blast2go	Glycosphingolipid biosynthesis - ganglio series	00604	74%
Blast2go	Metabolic pathways	01100	74%

Source	GOs	Term	Type	Identity
Blast2go	carbohydrate metabolic process	GO:0005975	Biological Process	74%
Blast2go	carbohydrate binding	GO:0030246	Molecular Function	74%
Blast2go	beta-galactosidase activity	GO:0004565	Molecular Function	74%
Blast2go	cation binding	GO:0043169	Molecular Function	74%
Blast2go	beta-galactosidase complex	GO:0009341	Cellular Component	74%
Blast2go	chloroplast	GO:0009507	Cellular Component	74%

Source	InterPros	Term	Type	Identity
Sma3	Multicopper oxidase, copper-binding site	IPR002355	-	-
Sma3	Beta galactosidase small chain/ domain 5	IPR004199	-	-
Sma3	Glycoside hydrolase, family 2	IPR006101	-	-
Sma3	Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich	IPR006102	-	-
Sma3	Glycoside hydrolase, family 2, TIM barrel	IPR006103	-	-
Sma3	Glycoside hydrolase, family 2, N-terminal	IPR006104	-	-
Sma3	TonB box, conserved site	IPR010916	-	-
Sma3	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	-
Sma3	Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain	IPR013812	-	-
Sma3	Glycoside hydrolase-type carbohydrate-binding, subgroup	IPR014718	-	-
Sma3		IPR015706	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain