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UniGene Name: biog3_v1.0_unigene4076
Length: 193 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
 UniGene Fasta (sense)
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| >biog3_v1.0_unigene4076
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Ace file of the UniGene biog3_v1.0_unigene4076 (antisense)
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If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
| Annotations |
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| Parent Assembly | Parent UniGene | Reads (related/total) |
|---|---|---|
| SustainPine v2.0 | sp_v2.0_unigene20780 | 3/3 |
| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | [O] COG0464 ATPases of the AAA+ class | - | - | 0.0 | 46% |
| FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 97% |
| Blast2go | protein | - | - | 0.0 | 83% |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Nucleoside-triphosphatase. | EC:3.6.1.15 | - | 0.0 | 83% |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Purine metabolism | 00230 | 0.0 | 83% | |
| Blast2go | Thiamine metabolism | 00730 | 0.0 | 83% | |
| Blast2go | Metabolic pathways | 01100 | 0.0 | 83% |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | nucleoside-triphosphatase activity | GO:0017111 | Molecular Function | 0.0 | 83% |
| Full-Lengther Next Prediction |
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Fln status: N-terminus
Fln database: coniferopsida.fasta
Fln subject: D5AE60
Fln msg: Distance to subject end: 351 aas, your sequence is shorter than subject: 37 - 388
Fln protein:
M
Protein Length:
38
Fln nts:
A
Fln Alignment:
Contig4076___MARKQASFAQELILYAISAAVSCLVLVVGLKHLDPNK
D5AE60_________________MARKQTSFAQELILYAISAAVSCLVLVVGLKHLDPNK
| SNPs (tot: 3) |
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| Position | A % | C % | G % | T % | Probability |
|---|---|---|---|---|---|
| 65 | 25 | 75 | 0.996473 | ||
| 66 | 25 | 75 | 0.996473 | ||
| 67 | 75 | 25 | 0.996473 |
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
