SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene3421

Length: 685 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene3421 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene11075	6/6

Source	Descriptions	Term	Type	Identity
AutoFact	protein TWIN LOV 1 [Arabidopsis thaliana] dbj\|BAB83170.1\| twin LOV protein 1 [Arabidopsis thaliana] gb\|AEC05613.1\| protein TWIN LOV 1 [Arabidopsis thaliana]	-	-	49%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	48%
Blast2go	protein twin lov 1	-	-	63%

Source	GOs	Term	Type	Identity
Blast2go	regulation of transcription, DNA-dependent	GO:0006355	Biological Process	63%
Blast2go	signal transduction	GO:0007165	Biological Process	63%
Blast2go	protein kinase activity	GO:0004672	Molecular Function	63%
Blast2go	signal transducer activity	GO:0004871	Molecular Function	63%
Blast2go	protein binding	GO:0005515	Molecular Function	63%

Source	InterPros	Term	Type	e value	Identity
Sma3	PAC motif	IPR001610	-	0.0	-
Sma3	PAS	IPR000014	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
565	33			66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain